Bathymodiolus thermophilus thioautotrophic gill symbiont: MS2017_1009
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Entry
MS2017_1009 CDS
T07716
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
bthg
Bathymodiolus thermophilus thioautotrophic gill symbiont
Brite
KEGG Orthology (KO) [BR:
bthg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bthg03021
]
MS2017_1009
Transcription machinery [BR:
bthg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MS2017_1009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
IF2_N
UCR_14kD
Sigma70_r3
SWC7
SpoIIID
Sua5_C
Noelin-1
Motif
Other DBs
NCBI-ProteinID:
AYQ56721
UniProt:
A0A3G3ILS5
LinkDB
All DBs
Position
complement(1308673..1309527)
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AA seq
284 aa
AA seq
DB search
MNQKSTLPSVQTPSANTGIGVQKYPPILSAEEEYALAVELYENHDLSAARKLVLSHMRFV
AFIAHGYKGYGLEQADLIQEGTIGLMKAVKRFNPNKNVRLASYAVYWIRAEIHEFIFKNW
KIVKVATTKSQRKLFFKLKKAKSHIYTSLSAEQAEEIANELGVRPKDVLEMESRLQFNDV
AFEATDSDEENTFAPERYLTDANAQTPEQLLLSNDTRKNQQQQLYKALSALDERSLDILQ
SRYLKEEKTTLHTLADKYDVSAERIRQLENKAMQKLKSLLKEQV
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaaatctaccctacccagcgttcaaacgcctagtgcaaatactggcattggt
gttcaaaaatatccgccgattctatcggcagaagaagaatatgccttggctgttgaattg
tatgaaaaccacgatttaagcgcagccagaaaactggtattatcacacatgcgttttgtt
gcttttattgcacatggctataaaggttatgggcttgagcaagcagatttaattcaagaa
ggcacgattggtttaatgaaggcggttaagcgctttaatcccaataaaaatgtacgcctt
gcttcttacgcagtttattggattcgtgctgaaattcacgaatttatctttaaaaactgg
aagattgtcaaggttgcgacgacgaaatcacagcgcaaattattttttaaacttaaaaaa
gcaaaatcacatatctatacctcccttagtgcagaacaagcagaagaaatagccaatgaa
ctgggtgtgcgccctaaagatgttttggaaatggaatctcgattacaattcaatgatgtt
gcttttgaggctacagactcagacgaagaaaatacctttgcaccagagcgttacctaact
gacgctaatgcacaaacacctgagcaattattactcagtaacgacactcgaaaaaaccag
caacaacaactctacaaagcactttccgcacttgatgaaagaagtttggatattttgcaa
tctagatacttgaaagaagagaaaacgaccctacatactttagcagacaagtatgatgtt
tctgctgaaaggattcgtcaacttgaaaacaaagccatgcaaaagcttaagagcttgtta
aaagaacaagtttaa
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