Bathymodiolus thermophilus thioautotrophic gill symbiont: MS2017_1265
Help
Entry
MS2017_1265 CDS
T07716
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
bthg
Bathymodiolus thermophilus thioautotrophic gill symbiont
Pathway
bthg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bthg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MS2017_1265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bthg03400
]
MS2017_1265
DNA repair and recombination proteins [BR:
bthg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MS2017_1265
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MS2017_1265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
AAA_19
DUF7180
P-loop_SecA
Kinesin
AAA_16
DUF1816
UB2H
Motif
Other DBs
NCBI-ProteinID:
AYQ56962
UniProt:
A0A3G3INC3
LinkDB
All DBs
Position
complement(1807765..1809759)
Genome browser
AA seq
664 aa
AA seq
DB search
MGRKFQLKSQFSPAGDQPNAIKALVKGVNAGEKFQTLLGVTGSGKTFTLANVIKQTKRAS
LIMAPNKTLAAQLYSEMKAFFPNNAVEYFVSYYDYYQPEAYVPASDTYIEKDSSINEQIE
QMRLSATKALLERDDVIIIASVSAIYGLGDPDSYMQMLLHLSVGEVIDQREILSRLSQMQ
YTRNDVSLTRGHFRVKGEVIDVFPADSEEQALRLEMFDNEIEAIYWFDPLTGEKLKLLQR
VTVYPQTHYVTPKSKILNMLDDIKDELKVRRKVLLSQNKLVEEQRLTQRVHMDIEMMSEL
GYCNGIENYSRYLSNRGEGQPPPTLLDYLPENALVILDESHVTASQIGGMYNGDRARKTT
LVDFGFRLPSALDNRPLKFTEFEDKIHQCILVSATPAQYELDVSSAIVQQLVRPTGLLDP
EIEVRKVDTQVDDLLSEIHKRVAVGERVLVTTLTKRMSEQLSDYLNEHSVKVRYLHSDID
TVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTMGR
AARNINGHVILYADRITKSMKKAMDETQRRRDKQQAHNEANNITPRSVVKPIVDILDTDA
KVEESEGEYDAQPMVNLSPVQLAKELKSLEKQMYGFAEELKFEQAAEVRNQIKQLKNSQF
KGNL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
gtgggtaggaaatttcaattaaaatcgcaattttctccagcaggagaccagccaaacgct
attaaggcgttggttaaaggggtgaatgcaggggaaaaattccaaacgctattgggcgtt
actggctcaggtaagacttttaccttggcaaatgttattaaacagaccaagcgagcgagc
ctgattatggcaccgaataaaacgctagcagcgcagttgtatagcgagatgaaagcattt
tttccgaacaatgcggtggaatattttgtgtcttattatgattactatcagcctgaggcg
tatgtgccagcgagtgatacttatattgagaaagattcatcgattaatgagcagattgaa
caaatgcgcctttctgcaaccaaggctttgttggagcgggatgatgtgattattattgcc
agtgtttcggcaatttatggtttgggcgacccagacagttatatgcaaatgttgttgcat
ttgagtgttggtgaggtgattgatcagcgagagattttgtcgcgtttgtcgcaaatgcaa
tacacgcgtaatgatgtgagtttgacgcgtgggcattttagagtgaaaggcgaagtaatt
gatgtgtttcctgcggattcggaagagcaggctttgcgacttgagatgtttgataatgaa
attgaggcaatttattggtttgatccactaacaggcgaaaaattaaagttactgcaaaga
gtaacggtttacccgcaaacacattatgtaacccctaaatccaagattttgaatatgctg
gacgatattaaagatgagctcaaagtacggcgcaaggtgttattgtcgcaaaataaattg
gtagaagagcagcgcttaacgcaacgagtgcatatggatattgagatgatgagtgagctg
ggatattgtaacggcattgaaaattattctcgttatttgtcaaataggggagaagggcag
ccgcctcctactttgttggattatctgcctgaaaatgcgttggtgattttggatgaatcg
catgtaactgcaagccagattggcggcatgtataacggcgatagggcacgcaaaaccacc
ttggttgatttcggctttagactgccttcggcactggacaatcgcccattaaaatttact
gaatttgaagataaaattcatcaatgtattttggtatctgccacgcccgcacagtacgaa
ttagatgtttctagtgccattgtgcagcagttggttagaccaacagggctactagatcct
gagattgaagtgcgtaaggtagatacacaagttgatgatttattgagtgaaatacacaaa
cgggttgcagttggcgagcgagtgttagtaacgactttaaccaagcggatgtctgagcaa
ttgagtgattatttgaatgaacatagtgttaaagttcgatatttgcactctgatattgac
acggttgaacgagtggaaattattcgtgatttgcgtttaggcgtgtttgatgtattggtg
ggtattaatttactgagagaaggtttagacatacctgaggtttctttggtggcaatttta
gatgcagataaagaagggtttttgcgctctgaacgctcactcattcaaaccatgggtagg
gcggctagaaatattaatggccatgtgattttatatgctgatagaatcaccaaatcaatg
aaaaaagccatggatgaaacacaacgccgacgcgacaaacaacaagcgcacaatgaggct
aacaacatcacccccagaagtgttgtaaaaccgattgttgacattttagacaccgatgcc
aaagtagaggaatctgagggtgaatatgatgcacaacctatggtgaacttatcacccgtg
caacttgcaaaagaacttaagtcgcttgaaaaacaaatgtatggctttgcagaagaatta
aaatttgaacaagcagcagaagtgcgcaatcaaatcaaacaacttaaaaattcacagttt
aaaggcaatttgtaa
DBGET
integrated database retrieval system
