Bathymodiolus thermophilus thioautotrophic gill symbiont: MS2017_1430
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Entry
MS2017_1430 CDS
T07716
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
bthg
Bathymodiolus thermophilus thioautotrophic gill symbiont
Pathway
bthg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bthg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MS2017_1430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bthg03021
]
MS2017_1430
03400 DNA repair and recombination proteins [BR:
bthg03400
]
MS2017_1430
Enzymes [BR:
bthg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MS2017_1430
Transcription machinery [BR:
bthg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MS2017_1430
DNA repair and recombination proteins [BR:
bthg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MS2017_1430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AYQ57118
UniProt:
A0A1J5TTZ2
LinkDB
All DBs
Position
complement(2056805..2057140)
Genome browser
AA seq
111 aa
AA seq
DB search
MARVTVEECLEFVDNRFELVLVAAKRAHQLNSGGYKSTLDVGKDKATVVALREIEAGLVN
ASILTEAHAMETELSAQEKKVDNAKMVEIEKELSVTAVDESADEMSEVVDA
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagtaactgttgaagagtgtttagagtttgttgataatcgttttgaattagtg
ttggttgcagctaagcgtgcacaccaattaaattctggtggatataaatcaactttggat
gttggcaaagataaggcaactgttgttgcgcttagggaaattgaagcaggtttggttaat
gcatcaatcttaactgaagcccatgcaatggaaacagagctatcagcacaagagaaaaaa
gtagataatgctaaaatggtagaaattgaaaaagagttatcggtaactgcagttgatgag
tcagcggatgaaatgagtgaagtggtagacgcttaa
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