Bathymodiolus thermophilus thioautotrophic gill symbiont: MS2017_1826
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Entry
MS2017_1826 CDS
T07716
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bthg
Bathymodiolus thermophilus thioautotrophic gill symbiont
Pathway
bthg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bthg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MS2017_1826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bthg03021
]
MS2017_1826
03400 DNA repair and recombination proteins [BR:
bthg03400
]
MS2017_1826
Enzymes [BR:
bthg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MS2017_1826
Transcription machinery [BR:
bthg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MS2017_1826
DNA repair and recombination proteins [BR:
bthg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MS2017_1826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
KH_TffA
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AYQ57500
UniProt:
A0A1J5U8A0
LinkDB
All DBs
Position
complement(2508733..2509713)
Genome browser
AA seq
326 aa
AA seq
DB search
MQGNARDFLKPKLVELTETANNQYKVVLEPLEKGFGHTLGNALRRTLLSSMVGSAITEVA
IEGVMHEFSAIDDVQEDVLDILLNLKEVSVALNTSESAEVVIDKKGPCEITVADIEANGT
DVVVFNKDKVIATINAGGHMRMTLKIGTGIGYDAAVARDDEASAIGGMQLDASFSPIKRV
SFTVDAARVDQKVNLDKLNIELETNGSVNAEEAIKRAATILQDQLSSFVELELVEEEEAL
PTSDDFDPQLLAAVDELELTVRSANCLKAEQIYYIGDLIQKSEQDLLRTPNLGRKSLNEI
KEVLTDKGLELGTAIENWPPVDLMSE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaaatgcaagagattttttaaagccgaagttggttgaattaacagagacggcg
aataatcaatataaggttgttcttgagcctttggaaaagggttttggtcatacgctaggt
aatgcattgagaagaactttattgtcttctatggtgggttcggcaattactgaagtggcg
attgaaggggtgatgcatgagttttcagccattgatgatgttcaagaagatgtgctggat
attttattaaaccttaaagaagtttcagttgctttaaacacttctgaatcagcagaggtt
gtcattgataaaaaaggcccttgtgaaattacagtggctgatattgaagcaaatggcacc
gatgttgttgtctttaataaagacaaagttattgccaccataaacgctggcggtcatatg
cgtatgacacttaagatcggtactggtattggttatgatgcagctgttgcgcgtgatgat
gaagcatcagccattggtggcatgcagttggatgcaagtttttcaccaattaagcgtgtt
agttttacggttgatgcggctcgtgttgatcaaaaggttaatcttgataaacttaatatt
gaattagaaaccaatggttccgttaatgccgaagaagcaattaagcgtgcagcaacaatt
ttacaagaccagttgtcttcatttgttgaattggaattagttgaagaagaagaggcgttg
ccaacttcagatgattttgatccacaattgttggcagcggttgatgaattagagttgaca
gtgcgtagtgcaaactgcttgaaagccgagcaaatttactacattggcgacctaattcaa
aaatctgagcaagacttgctaagaacacctaatttaggccgtaagtcgttgaatgaaatt
aaagaagtattaactgataaaggtctagaattaggcacagccattgaaaattggccacca
gttgatttaatgagcgaataa
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