Bathymodiolus thermophilus thioautotrophic gill symbiont: MS2017_1947
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Entry
MS2017_1947 CDS
T07716
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bthg
Bathymodiolus thermophilus thioautotrophic gill symbiont
Pathway
bthg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bthg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MS2017_1947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bthg03019
]
MS2017_1947
Enzymes [BR:
bthg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MS2017_1947
Messenger RNA biogenesis [BR:
bthg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MS2017_1947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
CMS1
UvrD-helicase
P-loop_SecA
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AYQ57609
UniProt:
A0A3G3IPJ3
LinkDB
All DBs
Position
complement(2615792..2617078)
Genome browser
AA seq
428 aa
AA seq
DB search
MGFSKLGLSDSILDAVTKKGYDKPSAIQEQAIPAVLQGKDVMAAAQTGTGKTAGFTLPIL
QILSKGTLAKSNQVRTLILTPTRELAAQVNDSVATYGKHLPLKSTVVFGGVKINPQMQKL
RSGVDILVATPGRLLDLYSQNAVKFDQLEILVMDEADRMLDMGFIHDIKKILKILPENRQ
TLMFSATFSDDIRKLAKTLVNNPVEISVTPRNTTVKSVKQWIHPVDKSKKQALLTHLIQE
HSWYQVLVFSRTKHGANRIATQLGKRGITAAAIHGNKSQGARTRALDDFKKGKVNVLVAT
DIAARGIDIVELPLVVNFDLPNVPEDYVHRIGRTGRAGSKGEAISLVSADEAKQLFDIER
LTQKKLDRIMIDDFIPDHNLPESSKNLLPPKNKKPKKSNPRNKPRYGKNSNSQENKAKKK
KSFWGNKK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgggtttttctaaactaggtttatcagattctattctcgacgctgttactaaaaaaggc
tacgataagccatcagcaatccaagagcaggcaattcctgcggtattgcaaggcaaagat
gtaatggctgccgcacaaacaggcacaggaaaaaccgcaggtttcaccttaccaatcttg
caaattttatccaaaggaacactggcaaaatccaaccaagtgcgcacacttatcctaacg
ccaacgcgtgaattggccgcccaagttaatgatagtgtagccacttatggcaagcacttg
ccactcaaatcaaccgtggtatttggtggcgtaaaaatcaatccacaaatgcaaaagctc
agaagtggcgtggatattttagtggcaactcctggcagattattggatttatattcacaa
aatgcagtgaagtttgatcaattagaaatcttagtaatggatgaagccgacagaatgtta
gacatgggttttattcatgatattaagaagattttaaagattttgcctgaaaatagacaa
accctaatgttttcagccactttttcagatgacatcagaaagttagcaaaaactctagtc
aacaaccccgtagaaatctcagtaaccccacgaaacaccacagtaaaatcagtcaagcaa
tggattcaccccgttgacaaatccaaaaaacaagcactactcacccacctcattcaagag
cacagctggtaccaagtattggtctttagtcgcaccaaacacggcgccaatcgcattgcc
acacaactcggaaaacgcggcatcaccgccgccgccattcacggcaacaaaagccaaggc
gcacgcaccagagcgcttgacgacttcaaaaaaggcaaagttaatgtcctagtcgccacc
gatattgccgctcgtggcattgacatcgtcgaactcccactcgtggtcaattttgaccta
ccaaatgtgccagaagactatgttcatcgtatcggtagaacaggccgtgcaggctcaaaa
ggcgaagccatttcattagttagcgccgatgaagccaaacagcttttcgacatcgaacgc
ctcacccagaaaaaactcgatcgcatcatgatagacgacttcatccccgaccacaacctg
ccagaatccagcaaaaacctattgccaccaaaaaataaaaaacccaagaagagcaaccct
cgcaataagccgagatatggcaaaaatagcaattctcaagaaaacaaagccaaaaagaaa
aaaagtttttgggggaataaaaaataa
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