Bathymodiolus thermophilus thioautotrophic gill symbiont: MS2017_1960
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Entry
MS2017_1960 CDS
T07716
Name
(GenBank) Primosomal protein N
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bthg
Bathymodiolus thermophilus thioautotrophic gill symbiont
Pathway
bthg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bthg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MS2017_1960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bthg03400
]
MS2017_1960
Enzymes [BR:
bthg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MS2017_1960
DNA repair and recombination proteins [BR:
bthg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MS2017_1960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_30
nSTAND6
Zn_ribbon_6
AAA_22
PIF1
AAA_19
nSTAND_NTPase5
Viral_helicase1
nSTAND3
SLFN-g3_helicase
AAA_16
SRP54
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AYQ57621
UniProt:
A0A3G3IP86
LinkDB
All DBs
Position
2626564..2628528
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AA seq
654 aa
AA seq
DB search
MSSILKVAVPVPLNQTFDYKCEVEVAQGMRVKVPFGRKKVIGIVLAKKDKSDFAKLKTIE
EVLDDTPILDQPMLDFLHWSANYYHHPIGEVIAAALPKNLRIGKPAIIKKVVGLPIETSE
PNFEPTDEQQHAIAQISTSLNQYHGFLLHGVTGSGKTEVYLRIAQKVLNQGKQVLVLVPE
IGLTPQMIARFESRLNTHIVSIHSQRNETQKLDAYLMAKDGSAGVVLGTRSAIFAPMPNL
GLIIIDEEHDTSFKQQSSFRYSARDLCFVRAKQADIPVILGTATPSLEMLKQVMDKKITR
LTLKKRASGAPLPKVNLIDMRTETGSALSALLIERMRQHLKNNKQVMLFINRRGYAPVYF
CTQCDWKSECDHCDSSMIYHRHINRLRCHHCGDEKIPEQTCPDCGEQSLEVFGYGTQRLE
ETLGSHFANTSIIRIDRDTTRRKKAFEQHLEQINSGEPCIIVGTQMLAKGHDFSNLAMVG
VLDIDGGLLSSNFRGTEYLAQLLIQVSGRAGRSGEQGEVAIQTRYPDHPIFNFVLSNRYT
QFASTLLKQRTQAKMPPFSHQALICANAKVKQNAQDFLQEMATLLKSIQIDTVEIWGPVS
AVMEKKADYYYFNLYLQSDNRKSLHQMLATLNQHTKTLTLKNKVRWYLDVDPVE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatcaatccttaaagttgctgttcccgttccattaaatcaaacttttgactataaa
tgcgaagttgaagtggctcaaggtatgcgggttaaggtgccttttggacgcaaaaaagtt
attggcattgtacttgctaaaaaagacaaaagtgattttgcaaaactaaaaaccattgaa
gaagtattggacgacacgccaatattagatcaaccaatgctcgattttttgcattggtca
gcaaattattaccatcatccaattggcgaagtgattgccgctgcattgccaaaaaatcta
cgcattggcaaaccagcaatcatcaaaaaagtggtcggactgccaattgaaaccagcgaa
cccaattttgaacccacagacgaacaacaacatgccattgcgcaaatctcaacttcttta
aaccaatatcacggatttttactccacggggtaaccggcagtggcaaaactgaagtctat
ctacgcatcgctcagaaggtactcaatcaaggcaaacaagtgctagtcctagtacctgag
attggacttacgccacagatgattgcacgctttgaatccagactgaacacgcacatcgtc
tcaattcactctcaacgcaacgaaacacaaaaattagacgcctatttaatggcaaaagac
ggctctgctggcgtggtacttggcacacgcagtgcgatttttgcacccatgccaaattta
gggttaattattattgacgaagaacacgacacttcttttaagcaacaatccagttttcgc
tattctgccagagatttgtgctttgtgcgtgccaaacaagccgatattcctgtgatatta
ggcacagccacaccatctttggaaatgctcaagcaagtgatggacaaaaaaattactcgc
ctaaccctaaaaaaacgcgcaagtggtgcacccttgccaaaagtaaatttgattgatatg
cgcaccgaaacaggtagtgcactttctgcattattaatcgaaagaatgcggcaacatctg
aaaaataacaaacaagttatgttgtttatcaaccgccgtggctacgctcccgtgtatttt
tgcacgcaatgcgattggaaatcagaatgcgaccactgtgattcgtcaatgatttatcac
cgccacattaatcgccttaggtgccaccattgtggcgatgaaaaaatacccgaacaaacc
tgccccgactgtggcgaacaatcgctagaagtgtttggttacggcacccaaagactggaa
gaaacactaggctcacacttcgccaacacctcaatcattcgcatcgaccgcgacaccact
cgccgcaaaaaagcctttgaacaacatttagaacaaatcaactctggtgaaccctgcatt
attgtcggcacgcaaatgctggccaaagggcacgacttctctaatctagcaatggtaggc
gttttggacattgacggtggcttattatccagcaatttccgtggcacagaatacttggcg
caactcctaattcaagtatcagggcgtgccggcagaagtggcgaacaaggcgaagtggct
attcaaacccgctaccctgaccaccccatttttaacttcgtactgtccaaccgctacact
caatttgccagcaccctactcaaacaacgcacccaagccaaaatgccaccattttcccat
caagccctcatctgcgctaacgccaaagtcaaacaaaatgcccaagattttttacaagaa
atggcaacactactcaaaagcattcaaatagacaccgtggaaatttgggggcccgtttct
gccgttatggaaaaaaaagccgactattattattttaatctctacttgcaatccgacaac
agaaaatccctacaccaaatgcttgccaccctcaaccaacacaccaaaacacttaccctt
aaaaataaagtccgttggtatttagatgttgatcccgtcgaataa
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