Bathymodiolus thermophilus thioautotrophic gill symbiont: MS2017_1990
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Entry
MS2017_1990 CDS
T07716
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bthg
Bathymodiolus thermophilus thioautotrophic gill symbiont
Pathway
bthg00300
Lysine biosynthesis
bthg00470
D-Amino acid metabolism
bthg01100
Metabolic pathways
bthg01110
Biosynthesis of secondary metabolites
bthg01120
Microbial metabolism in diverse environments
bthg01230
Biosynthesis of amino acids
Module
bthg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bthg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MS2017_1990
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MS2017_1990
Enzymes [BR:
bthg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
MS2017_1990
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
AYQ57648
UniProt:
A0A3G3IPI7
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All DBs
Position
complement(2652398..2653639)
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AA seq
413 aa
AA seq
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MSFSYQNNTLHADSVAIPELVDTYGSPLYVYSRTDIENNWREFDQAFGTHPHLVCYAVKA
NSNLAVLNVLAKIGAGFDIVSIGELERVLAAGGTANKCVFSGVAKTAIEIERALEVGVRC
FNVESASELNRIESVARSVGKQAPISIRVNPNVDAKTHPYISTGLKENKFGVDMSEALDL
YQHIQHSEHLTVQGLDCHIGSQITDVSPFLDALDKVLTLLDQLNTHNINIQHLDLGGGVG
INYEGEETINIQAYIDAIISKVGQTEIILEPGRAIVGNAGIFITKVEFLKQNSTHAFAIV
NGAMNDLLRPSFYNAYHQVLPINKTPAGTQANWNLVGPICETGDFLAKNRDLSLSEGDYL
ALMSTGAYGFTMSSNYNSRPRVAEVIVSNTNHQLIRKRETVQDLFANEYLYEI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttcttatcaaaacaacaccctgcacgccgactctgttgccattccagagtta
gtcgatacttacggatcaccactgtatgtctattctcgcaccgatattgaaaacaactgg
cgtgaatttgaccaagcctttggcacgcatccacacttagtgtgttatgcagtcaaagca
aattctaatttggcagtgctgaatgtattggcaaaaatcggcgcaggctttgacatcgtc
tccattggcgaattagaacgcgtacttgccgcaggcggcacagcaaataaatgcgttttt
tcaggcgtagcaaaaaccgcaatagaaatcgaacgagcactcgaagtaggcgtgcgttgc
tttaatgtagaatccgcctccgaacttaatagaatagaatccgtcgcccgctccgtcggc
aaacaagccccaatttccatccgtgtcaatcccaatgttgacgccaaaacccacccctac
atctccacaggactaaaagaaaacaaattcggcgttgacatgagcgaagcacttgattta
taccaacacatccaacattccgaacacctaacagtacaaggactagactgccacatcggc
tcacaaatcaccgatgtttccccattcttagatgccctagataaagtattaaccctactc
gaccaattaaacacacacaacatcaacattcaacacctagacctaggcggcggcgttggc
atcaattacgaaggcgaagaaaccatcaatatccaagcctacattgacgccatcatcagc
aaagtagggcaaaccgaaatcatcctagaacccggcagagccattgtcggcaatgccggt
atttttatcaccaaagttgaatttctaaagcaaaactccacccacgcattcgccattgtc
aatggcgccatgaacgacctcctacgccccagtttctacaacgcctaccaccaagtccta
cccatcaacaaaacccccgccggcacccaagccaactggaacctagtcggccccatctgc
gaaaccggcgatttcctcgccaaaaaccgagatttatccctatccgaaggcgactattta
gcactaatgtccaccggcgcctacggcttcaccatgagctccaactacaacagccgcccc
cgagtcgccgaagtcatagtctcaaacaccaaccaccagttaatacgcaagcgtgagact
gtgcaggatttgtttgctaatgaatatttgtatgaaatttaa
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