Bacillus thuringiensis serovar kurstaki HD-1: BTK_28955
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Entry
BTK_28955 CDS
T03473
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bthi
Bacillus thuringiensis serovar kurstaki HD-1
Pathway
bthi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bthi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTK_28955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bthi03019
]
BTK_28955
03009 Ribosome biogenesis [BR:
bthi03009
]
BTK_28955
Enzymes [BR:
bthi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BTK_28955
Messenger RNA biogenesis [BR:
bthi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BTK_28955
Ribosome biogenesis [BR:
bthi03009
]
Prokaryotic type
rRNA helicases
BTK_28955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DbpA
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AIE36780
LinkDB
All DBs
Position
complement(5592734..5593783)
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AA seq
349 aa
AA seq
DB search
MLDHIEKGTLSLECLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFSATLPEDVE
KLSRTYMNSPIHIEIKAAGITTDKIEHTLFEVIEDEKLSLLKDVTTIENPDSCIIFCRTQ
ENVDHVYRQLKRANYPCDKIHGGMVQEDRFEVMDDFRKGKFRYLVATDVAARGIDIDNIT
HVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYENRFLEEIEEYIGFEIPKAIGPS
KEEVMKEKAAFEEKIHAKPIIKKDKNADINKGIMKLYFNGGKKKKIRAVDFVGTIAKIKG
VTAEDIGIITIQDNVSYVEILNGKGPLILKVMKTTTIKGKQLKVHEAIK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
gtgttggatcatattgagaagggtaccctttctttagagtgtttgaagtatttagttatt
gatgaagcagatgagatgctaaatatgggctttatcgatcaagtagaggcaattattgat
gaattacctacaaaaagaatgacgatgttattttcagcaacacttccagaagatgttgag
aaattgtctcgtacatatatgaattcaccaattcatattgaaattaaagcagctgggatt
acgacggataaaattgaacatactctttttgaggtgatagaagacgagaagctttcacta
cttaaagatgtaacaacgattgagaatcctgatagctgtattattttctgtcgtacacaa
gaaaatgtagatcatgtatatagacaattaaaacgagctaactatccttgtgataaaata
catggtggtatggtacaagaagatcgttttgaagtcatggatgattttagaaaaggaaaa
ttccgttatttagtagccacagatgtagctgcgagaggaattgatattgataatattaca
catgttattaattatgatattccacttgaaaaagaaagctatgtacatcgtactggaaga
acgggacgagctggaaatagtggaaaagctattacatttataacaccatatgaaaataga
tttttagaagagattgaggagtatattggatttgaaattccaaaggcaattggaccttca
aaagaagaagttatgaaagagaaagctgcatttgaagaaaagatacatgctaaaccaatt
ataaagaaagataaaaatgcagatatcaacaaaggcattatgaagctgtactttaatggc
gggaagaaaaagaaaattagggcggtagatttcgtcggtacaattgctaaaattaaaggt
gttacagcagaagatataggtattattacgatacaagataatgtttcttacgttgaaata
ttaaatggaaaaggaccacttatcttgaaagtcatgaagactacaacgattaaagggaaa
caactaaaagttcatgaagcaattaagtaa
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