Burkholderia thailandensis 2002721643: BG87_1790
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Entry
BG87_1790 CDS
T03882
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bthl
Burkholderia thailandensis 2002721643
Pathway
bthl03410
Base excision repair
bthl03430
Mismatch repair
bthl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bthl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BG87_1790 (recJ)
03430 Mismatch repair
BG87_1790 (recJ)
03440 Homologous recombination
BG87_1790 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bthl03400
]
BG87_1790 (recJ)
DNA repair and recombination proteins [BR:
bthl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BG87_1790 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BG87_1790 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BG87_1790 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AJX99682
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Position
I:complement(1984606..1986300)
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AA seq
564 aa
AA seq
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MTRIVTRPAVPAALDALARHGLHPVLARLYAARGIASPADVETALSRLVPPAQLKGCADA
AALLADALEAGRKMLVVADYDCDGATACAVAVRGLRMFGAKIDYLVPNRFEYGYGLTPEI
VELAAARKPDLLITVDNGIASVDGVAAANARGIDVLVTDHHLPGDTLPAARAIVNPNQPG
CAFPSKHIAGVGVMFYVLLALRAELRARGAFGDARPEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGVAALFRAAARDARSASGFDLGFGLGPRLNAAGRLSDMSL
GIECLTTDDVGRAWELAQQLDAMNRERREIEAGMQQQALADLASVDPAEAATITLFNPEW
HQGVIGIVAGRLKERFHRPAFTFAHADGSGARVKGSGRSIPGFHLRDAIDLISKREPDLI
VTFGGHAMAAGVTLDTGNVPRFAAAFEAVAREWLSDDALARVIETDGDLEDAYFTPQVVE
LLDAAVWGQGFPAPLFSGEFDVASQALVKDKHLKLQLMRGRQRFNAIWFNHAEPLPARAT
LAFRLASDTWNGTTRVQLIVEHAA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatcgtcacccgcccagctgtccccgccgcgctcgacgcgctcgcccgccac
gggctgcatcccgtgctcgcccgcctgtacgcggcgcgcggaatcgcgtcgcccgccgac
gtcgaaaccgcgctgtcgcgcctcgtgccgcccgcgcagctcaaaggctgcgcggacgcc
gccgcgctcctcgccgatgcgctcgaagccggccgcaagatgctcgtcgtcgccgattac
gactgcgacggcgcgaccgcctgcgcggtcgccgtgcgcggcttgcggatgttcggcgcg
aagatcgactacctcgtgccgaaccgcttcgaatacggctacgggctcacgcccgagatc
gtcgagctcgcggccgcgagaaagcccgatctgctgatcaccgtcgacaacggaatcgcg
agcgtcgacggcgtcgcagccgcgaacgcgcgcggcatcgacgtgctcgtcaccgatcac
cacctgcccggcgacacgctgcccgccgcacgcgcgatcgtcaatccgaaccagcccggc
tgcgcgttcccgagcaagcacatcgcgggcgtcggcgtgatgttctacgtgctgctcgcg
ctgcgcgccgagctgcgcgcgcgcggcgcgttcggcgacgcccgccccgagccgcggctc
gacggcctcctcgacctcgtcgcgctcggcacggtggccgacgtcgtgcgcctcgacggc
aacaatcgcgtgctcgtcgcgcagggcctgcagcggattcgcaacggacggatgcagccc
ggcgtcgccgcgctctttcgcgcggccgcgcgcgacgcgcgcagcgcatcgggcttcgat
ctcggcttcggcctcggcccgcgcctgaacgcggcgggccgcctgtcggacatgtcgctc
ggcatcgaatgcctgacgacggacgacgtcggccgcgcatgggagctcgcgcagcagctc
gacgcgatgaaccgcgagcggcgcgagatcgaggccggcatgcagcagcaggcgctcgcc
gatctcgcatcggtcgatcccgccgaagcggcgacgatcacgctcttcaaccccgagtgg
caccagggcgtgatcgggatcgtcgcgggccggctgaaggagcgcttccatcggccggcg
ttcacgttcgcgcacgcggacggcagcggcgcgcgcgtgaagggctccggccgctcgatt
cccggttttcatctgcgcgacgcgatcgacctgatctcgaagcgcgagcccgatctgatc
gtcacgttcggcggccacgcgatggcggcgggcgtcacgctcgacaccgggaacgtgccg
cgctttgccgccgcgttcgaggcggtcgcgcgcgaatggctgtccgacgacgcgctcgcg
cgcgtgatcgagacggacggcgatctcgaggatgcgtacttcacgccgcaggtcgtcgag
ctgctcgatgcggccgtctggggccagggcttcccggcgccccttttctccggcgaattc
gacgtggcgtcgcaggcgctcgtcaaggacaagcacctgaagctgcaattgatgcgcggc
cgccagcgcttcaacgcgatctggttcaaccacgcggagccgctgcccgcgcgcgcgacg
ctcgcgttccggctcgcgagcgatacgtggaacgggacgacacgcgtgcaactgatcgtc
gagcacgccgcataa
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