Burkholderia thailandensis 2002721643: BG87_2428
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Entry
BG87_2428 CDS
T03882
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bthl
Burkholderia thailandensis 2002721643
Pathway
bthl02024
Quorum sensing
bthl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bthl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BG87_2428 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BG87_2428 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bthl03019
]
BG87_2428 (hfq)
03036 Chromosome and associated proteins [BR:
bthl03036
]
BG87_2428 (hfq)
Messenger RNA biogenesis [BR:
bthl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BG87_2428 (hfq)
Chromosome and associated proteins [BR:
bthl03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BG87_2428 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
SelB_WH1
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AJX99390
LinkDB
All DBs
Position
I:2743651..2744277
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AA seq
208 aa
AA seq
DB search
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGRGPRTGGGGRPGGREGGGHGPYGSHGGPRESRGEGGGYGARESR
GDGGYGSREPRGDGGYGSREPRGDGGGYGSRESRGDGGYGTREPREPRESYGAPQEGAST
PSGTQDRNSNGPVIVTRRRRSLGPTDGQ
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcctgcagaatcccatccgcaaaacgacttcatcaatgccgcgcgcaaggaa
cgcaagcgcgtcgaaatttatctcgtcaacggtattcgcctgacgggatgcatcgagtcg
ttcgaccagtatctggtgatgctgcgcacgcctgtcggcctgcaaggcatctataaacgc
gccatctcgacgatccagctcgacacgggcggctcacgtccgggcggccgcggcccgcgc
acgggcggcggcggtcgtcccggcggacgcgaaggcggtggtcacggtccgtacggctcg
cacggcggcccccgcgagtcgcggggtgaaggcggcggctatggcgcccgcgaatcccgt
ggcgacggcggttacggctcccgcgaaccccgtggcgacggcggttatggctcccgcgag
ccccgtggcgacggcggcggttacggctcccgcgaatcccgtggcgacggcggatatggc
acgcgtgaaccgcgcgagccccgcgagtcttacggcgcgccgcaagaaggcgcatcgacg
ccgtccggcacgcaagatcgcaacagcaacggccccgtgatcgtcacgcgccgccgccgc
tcgctcggcccgaccgacggtcaataa
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