Burkholderia thailandensis 2002721643: BG87_3369
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Entry
BG87_3369 CDS
T03882
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bthl
Burkholderia thailandensis 2002721643
Pathway
bthl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bthl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BG87_3369 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bthl03021
]
BG87_3369 (rpoD)
Transcription machinery [BR:
bthl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BG87_3369 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KIND
Motif
Other DBs
NCBI-ProteinID:
AJY02565
LinkDB
All DBs
Position
II:23341..25383
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AA seq
680 aa
AA seq
DB search
MTKKLNEVSVDDDANQSDEQPTAASGKGEKAKARDRRAKEKALLKEAFATSTPGTAEELE
ERRTKLRALIKLGKERGFLTYAEINDHLPDNFTETEALEGIIGTFNDMGVAVYEQAPDAE
TLLLNDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEI
AKRIEDGLRHMVMAISACPTTIADILAMAERVANEEIRVDELVDGLIDPNAADTDGFSEK
DAEEIENEDEEAEEDDEEEEEDDDGAAQATANAAQLEALKRASLEKFALISEWFDKMRRA
FEKEGYKSKSYLKAQETIQNELMSIRFTARTVERLCDTLRAQVDEVRQVERQILHIVVDK
CGMPRSEFIARFPGSETDLDWAEKVAAEGHSYGAILSRNIPAIREQQQRLLDLQARVVLP
LKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMK
AVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQET
GLEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTNTVAPADA
ALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIEAKA
LRKLRHPSRSDKLKSFLEGN
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaagctgaacgaagtatccgtcgatgacgacgcaaaccagagcgacgaacag
cctaccgctgcgtcgggcaaaggcgaaaaggccaaggcgcgcgatcgccgcgccaaggaa
aaggcgctgctgaaggaagcgttcgcgacgagcacgcccggcacggccgaggagctcgaa
gagcgccgtacgaagctgcgcgcgctgatcaagctcggcaaggagcgtggcttcctcacg
tacgccgaaatcaacgaccatctgccggacaacttcacggaaacggaagcgctcgaaggc
atcatcggcacgttcaacgacatgggcgtcgcggtgtacgagcaggcgcccgacgccgag
acgctgctgttgaacgacaacgcgcccgccgcgtcgtccgacgatgaagtcgaagaggaa
gcggaagtcgcgctgtcgaccgtcgattccgaattcggccgcacgaccgatccggtccgg
atgtacatgcgcgagatgggcacggtcgagctgctcacgcgcgagggcgaaatcgagatc
gcgaagcggatcgaggacggcctgcgccacatggtgatggcgatttccgcgtgcccgacg
acgatcgccgacatcctcgcgatggccgagcgcgtcgcgaacgaggagattcgcgtcgac
gagctcgtcgacggcctgatcgatccgaacgccgccgataccgacggcttctcggagaag
gacgccgaggaaatcgagaacgaggacgaggaagccgaagaggacgacgaagaggaagaa
gaggacgacgacggcgccgcgcaagcgaccgccaatgcggctcagctcgaagcgctgaag
cgcgcgtcgctcgagaagttcgcgctgatcagcgaatggttcgacaagatgcgccgcgcg
ttcgagaaggaaggctacaagtcgaagtcgtacctgaaggcgcaggaaacgatccagaac
gagctgatgtcgatccgcttcaccgcgcgcaccgtcgagcgtctgtgcgacacgttgcgc
gcgcaggtcgacgaagtgcgtcaggtcgagcgtcagattctgcacatcgtcgtcgacaag
tgcgggatgccgcgctcggaattcatcgcgcgcttcccgggcagcgagaccgatctcgac
tgggcagagaaggtcgcggccgaaggccattcgtacggcgcgatcctgtcgcgcaacatc
ccggcgatccgcgagcagcagcagcgtctgctcgacttgcaggcgcgcgtcgtgctgccg
ctgaaggacctgaaggaaaccaaccgccagatggcggcgggcgaactgaaggcgcgccag
gcgaagcgcgagatgaccgaggcgaacctgcgtctcgtgatctcgatcgcgaagaagtac
acgaaccgcggcctgcagttcctcgatctgatccaggaaggcaacatcggcctgatgaag
gccgtggacaagttcgaataccgtcgtggctacaaattctcgacctacgcgacgtggtgg
atccgccaggccatcacgcgctcgatcgcggaccaggcgcgcacgatccgtattccggtt
cacatgatcgagacgatcaacaagatgaaccgcatctcgcggcagatcctgcaggaaacc
ggcctcgagccggacccggctacgcttgccgagaagatggagatgccggaagacaagatc
cgcaagatcatgaagatcgcgaaggagccgatctcgatggaaacgccgatcggcgacgac
gacgattcccatctcggcgacttcatcgaggacaccaacacggtcgcgccggcggatgcc
gcgctgcatgcgagcatgcgcgacgtcgtgaaggacgtgctcgattcgctgacgccgcgc
gaggcgaaggtgctgcggatgcgctttggtatcgaaatgagcaccgatcacacgctcgag
gaagtcggcaagcagttcgacgtcacccgcgagcggattcgtcagatcgaggcgaaggcg
ctgcgcaagctgcgtcatcctagccgttcggacaagctgaagtcgttcctcgaggggaac
tga
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