Burkholderia thailandensis USAMRU Malaysia #20: BTRA_2197
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Entry
BTRA_2197 CDS
T03391
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bthm
Burkholderia thailandensis USAMRU Malaysia #20
Pathway
bthm02024
Quorum sensing
bthm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bthm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTRA_2197 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BTRA_2197 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bthm03019
]
BTRA_2197 (hfq)
03036 Chromosome and associated proteins [BR:
bthm03036
]
BTRA_2197 (hfq)
Messenger RNA biogenesis [BR:
bthm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BTRA_2197 (hfq)
Chromosome and associated proteins [BR:
bthm03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BTRA_2197 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AIC88194
LinkDB
All DBs
Position
1:2406515..2406754
Genome browser
AA seq
79 aa
AA seq
DB search
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARPVNFHPDAEAAS
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaaagggcaattgttacaagacccgtttttgaacgcactgcgtaaagagcac
gtgccggtttcgatctatctcgtgaacggcatcaagctccaagggaacatcgaatcgttc
gaccagtacgtcgtgttgctccggaacacggttacccagatggtttacaagcacgccatt
tcgacggtcgtgccggcgcgtccggtgaacttccacccggatgcggaagcagcgtcctaa
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