Burkholderia thailandensis USAMRU Malaysia #20: BTRA_3021
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Entry
BTRA_3021 CDS
T03391
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bthm
Burkholderia thailandensis USAMRU Malaysia #20
Pathway
bthm03030
DNA replication
bthm03430
Mismatch repair
bthm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BTRA_3021 (dnaE)
03430 Mismatch repair
BTRA_3021 (dnaE)
03440 Homologous recombination
BTRA_3021 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bthm03032
]
BTRA_3021 (dnaE)
03400 DNA repair and recombination proteins [BR:
bthm03400
]
BTRA_3021 (dnaE)
Enzymes [BR:
bthm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BTRA_3021 (dnaE)
DNA replication proteins [BR:
bthm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BTRA_3021 (dnaE)
DNA repair and recombination proteins [BR:
bthm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BTRA_3021 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
AIC87587
LinkDB
All DBs
Position
1:complement(3371766..3375290)
Genome browser
AA seq
1174 aa
AA seq
DB search
MSDPRFVHLRVHSEFSIADGIVRLDDIVKSAAEDGQGALALTDLGNAFGLVRFYKEARDA
GIKPIAGCDVWITNRDDRDKPSRLLLLVKNKRGYLNLCELLSKAWLTNQYRGRAELDASW
LEGELADGLLALSGAQQGDIGLALAAGNEAAARRHAQRWAQVFPGGFYLELQRYGQPGAE
AYIQQAVTIAAELKLPVVATHPLQYMTADDFTAHEARVCISEGDILANPRRQKRFTTEQF
FRTQGDMAALFADLPSALANTVEIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLVQLSQE
GLEKRLAQLYPDEVEREAQRDKYNQRLDFECGTIKKMGFPGYFLIVADFINWAKNNGVPV
GPGRGSGAGSLVAYSLGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYV
KEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGVAKLIPFKPGKHVTIADAMK
EEPLLQERYDNEDEVHQLLDLAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDDGG
VVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKENWSLAQVPLDDPASFQ
ILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVSLYRPGPMDLIPSFCARKHGREK
VDYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAKHRE
IFAEGAAKNGLTREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAA
NMTLAMDDTDKVKILFDDCVVNGLAVLPPDINQSHYRFEPVAQADGKPSRTIRYGLGAIK
GSGQNAIEEILRAREEKPFADLFDFCERIDRRVVNRRTIEALIRAGALDSLHANRAQLLA
SVPLAMEAAEQAAANALQAGLFDIGGVPAHQHALVDEPAWDDKRRLQEEKAALGFYLSGH
LFDAYRDEVRRFVRQKLGELKEGRDKVVAGVIASLRTQMTQRGKMVIALLDDGTGQCEVT
VFNEQFDANRALFKEDELLIVQGQARNDAFTGGIRFTADSVMDLERARSRYAQAVRMTMN
GNADAAALRRVLEAHVAKPDDAPPVEAPAPRGGRDGGRRAQAVMPNGLAVRIAYRNARAQ
GEMHLGDAWRVKPSDTLLADLRAAFGGSVVEIVY
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatccccgtttcgttcatctccgcgtccactccgaattctcgattgccgacggc
atcgtgcgtctcgacgatatcgtcaagtcggcggccgaagacggtcagggcgcgctcgcc
ctgaccgacctcggcaacgcgttcggtctcgtccgtttctacaaggaagcccgcgacgcg
ggcatcaagccgatcgccggctgcgacgtctggatcaccaaccgcgacgatcgcgacaag
ccgtcgcggctgctgctgctcgtcaagaacaagcgcggctacctgaatctctgcgaactg
ctgtcgaaggcgtggctcacgaaccaataccgcggccgcgcggaactcgacgcgagctgg
ctcgaaggcgagctcgccgacgggctgctcgcgctgtccggcgcgcagcagggcgatatc
ggcctcgcgctcgcggcgggcaacgaggcggccgcgcgccgccacgcgcagcgctgggcg
caggtgtttccgggcggcttctatctcgaattgcagcgctacggccagccgggcgcggaa
gcgtacatccagcaggcggtgacgatcgcggccgagctgaagctgcccgtcgtcgcgacg
catccgctgcaatacatgacggccgacgatttcaccgcgcacgaggcgcgcgtgtgcatc
tcggaaggcgatatcctcgcgaatccgcgccgtcagaagcgcttcacgaccgagcagttc
ttccgcacgcagggcgacatggccgcgctgttcgccgatctgccctcggcgctcgcgaac
acggtcgagatcgcgaagcgctgcaacctgacgctcgagctcggcaagccgaagctgccg
ctctttccgacgcccgacggtatgtcgctcgacgactacctcgtgcagctgtcgcaggaa
gggctcgagaagcgcctcgcgcagctctatccggacgaggtcgagcgtgaagcgcagcgc
gacaagtacaaccagcgtctcgatttcgagtgcggcacgatcaagaagatgggcttccca
ggctacttcctgatcgtcgcggacttcatcaactgggcgaagaacaacggcgtgccggtg
ggccccgggcggggctcgggcgcgggctcgctcgtcgcgtattcgctcggcatcacggat
ctcgatccgctgcgctacaacctgctgttcgagcgcttcctgaacccggagcgggtgtcg
atgccggacttcgacatcgacttctgccagcacgggcgcgaccgcgtgatccagtacgtg
aaggaaaagtacggcgcggacgcggtgtcgcagatcgccaccttcggcacgatggccgcg
aaggcggccgtgcgcgacatcggccgcgtgctcgatctcggctacatgttcaccgacggc
gtcgcgaagctgatcccgttcaagccgggcaagcacgtgacgatcgccgacgcgatgaag
gaagagccgctgttgcaggagcgctacgacaacgaggacgaagtccaccagttgctcgat
ctcgcgcagcgcgtcgagggcctgacgcgcaacgtcggcatgcacgcgggcggcgtgctg
atcgcgcccggcaagctgacggacttctgcccgctctacacgcagggcgacgacggcggc
gtcgtcagccagtacgacaaggacgacgtcgaagccgtcggcctcgtgaagttcgacttt
ctggggctgacgacgctcacgatcctcgactgggccgagcgctacatccgccgtctcgat
ccgagcaaggagaactggtcgctcgcgcaggtgccgctcgacgatccggcgtcgttccag
attctcaagaaggccaacacggtcgccgtgttccagctggaaagccgcggcatgcagggg
atgctgaaggacgcgcagcccgaccgcttcgaggacatcatcgcgctcgtgtcgttgtac
cgtccgggcccgatggatctgatcccgagcttctgcgcgcgcaagcacgggcgcgagaag
gtcgactatcctgatccgcgcgtcgagcctgtcctgaaagagacctacgggatcatggtc
tatcaggagcaggtgatgcagatggcgcagatcatcggcggctactcgctcggcggcgcg
gacttgctgcgccgcgcgatgggcaagaagaagcccgaggaaatggccaagcatcgcgag
atcttcgcggagggcgcggcgaagaacggcctcacgcgcgagaagtccgacgagatcttc
gacttgatggagaagttcgcgggctatggcttcaacaagtcgcacgcggccgcgtacgcg
ctgctcgcgtattacaccgcgtggctgaaggcgcaccatccggccgaattcatggcggcc
aacatgacgctcgcgatggacgacaccgacaaggtgaagatcctgttcgacgattgcgtc
gtcaacggcctcgccgtgctgccgcccgacatcaatcagtcgcactaccgcttcgagccg
gtcgcgcaagccgacggcaagccttcgcgcacgatccgctacggcctcggcgcgatcaag
ggcagcggccagaacgcgatcgaggagatcctgcgcgcgcgcgaggaaaagccgttcgcc
gatctgttcgatttctgcgagcggatcgaccggcgcgtcgtgaaccgccgcacgatcgag
gcgctgatccgcgcgggcgcgctcgattcgctgcacgcgaaccgcgcgcaactgctcgcg
tcggtgccgctcgcgatggaggccgccgagcaggcggccgcgaacgcgctgcaggcgggc
cttttcgacatcggcggcgtgcccgcgcaccagcacgcgctcgtcgacgagcccgcctgg
gacgacaagcgccgcctgcaggaagagaaggccgcgctcggcttctatctgtccggccac
ctgttcgacgcgtatcgcgacgaggtgcgccgtttcgtgcgccagaagctcggcgagttg
aaggaagggcgcgacaaggtggtggccggcgtgatcgcgtcgctgcgcacgcagatgacg
cagcgcggcaagatggtgatcgcgctgctcgacgatggcaccggccaatgcgaagtcacc
gtgttcaacgagcagttcgacgcgaaccgggcgcttttcaaggaggacgagctgctgatc
gtccaggggcaggcgcgcaatgacgcgttcacgggggggattcgcttcaccgccgattcg
gtgatggatctcgagcgcgcgcgcagccgttacgcgcaggcggtgcggatgacgatgaac
ggcaacgcggacgcggcggcgctgcgccgcgtgctcgaagcgcacgtcgcgaaacccgac
gacgcgccgcccgtcgaggcgccggcgccgcgcggcggccgcgacggcgggcgccgcgcg
caggcggtgatgccgaacggcctcgccgtgcggatcgcataccgtaatgcgcgcgcgcaa
ggcgagatgcacttgggcgacgcatggcgcgtgaagccgagcgacacgctgctcgccgat
ctgcgcgcggcgttcggcggcagcgtcgtcgagatcgtctactga
DBGET
integrated database retrieval system
