Burkholderia thailandensis USAMRU Malaysia #20: BTRA_3413
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Entry
BTRA_3413 CDS
T03391
Name
(GenBank) bacterial regulatory helix-turn-helix , lysR family protein
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
bthm
Burkholderia thailandensis USAMRU Malaysia #20
Module
bthm_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
bthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bthm03000
]
BTRA_3413
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bthm01504
]
BTRA_3413
Transcription factors [BR:
bthm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BTRA_3413
Antimicrobial resistance genes [BR:
bthm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
BTRA_3413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AIC87385
LinkDB
All DBs
Position
1:complement(3790029..3791003)
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AA seq
324 aa
AA seq
DB search
MDRIQAMEVFTRVVEANSFTRAAETLGMPRASVTTIIQNLEALLGARLMHRTTRRLSLTP
EGAAYYEHCIKIITEIAETDASFQVGKRKPSGALRVHMPSSLGRRLVIPALPIFRQRYPD
VVLDLGLSDRPVDPVEEGIDCMIRIGPLEDSSMVARRIGMLKRVTCASPDYLKRFGEPME
IAELAAHHAVNFRASHGSRPVPWVFVIDGKPVEVRMEGGVTVNDSDAYVTCGVEGFGMIQ
PTLFMVLPHLLDGTLKEVLPGLNPKPKPISIVYPNNRHLSAKVRVFADWIAELFDSTPAL
EGGEDWRGGVAAREKPARRGQVAA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcattcaggcaatggaagtcttcacccgcgtggtggaggcgaacagcttcacg
cgggccgcggagacgctcgggatgccgcgcgcgtcggtgacgacgatcatccagaatctc
gaggcgctgctcggcgcgcgcctgatgcaccggaccacgcgccggctgtctctgacgccg
gagggcgccgcgtactacgagcactgcatcaagatcatcaccgagatcgcggagacggac
gcgagctttcaggtcggcaagcgcaagccgagcggcgcgctgcgcgtgcacatgccgagc
tcgctcggccggcggctcgtgattcccgcgctgccgatcttccgccagcgctacccggac
gtcgtgctcgatctggggctgtccgatcgccccgtcgatccggtcgaagaggggatcgac
tgcatgatccgcatcgggccgctcgaggattcctcgatggtcgcgcggcgcatcgggatg
ctcaagcgcgtcacctgcgcgtcgcccgactacctgaagcgcttcggcgaacccatggag
atcgcggaactggccgcgcatcatgcggtgaattttcgcgcgagccacggttcgcggccg
gtgccttgggtgttcgtgatcgacggcaagccggtcgaggtcaggatggagggcggcgtg
accgtcaatgattcggatgcctacgtgacatgcggcgtcgagggtttcgggatgatccag
ccgacgctcttcatggtgctgccgcacctgctcgacggcacgctgaaagaggtgctgccg
ggcttgaatccgaagccgaagccgatctcgatcgtttatccgaacaaccggcacctgtcc
gcgaaggtccgcgtgttcgcagactggatcgccgagctgttcgattcgacgcccgcgctc
gaaggcggcgaagactggcgcggcggcgtcgcggcgcgcgagaagccggcgcggcgcggg
caggtcgcggcatag
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