Burkholderia thailandensis USAMRU Malaysia #20: BTRA_3437
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Entry
BTRA_3437 CDS
T03391
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bthm
Burkholderia thailandensis USAMRU Malaysia #20
Pathway
bthm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bthm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTRA_3437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bthm03019
]
BTRA_3437
Enzymes [BR:
bthm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BTRA_3437
Messenger RNA biogenesis [BR:
bthm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BTRA_3437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Ric8
DegT_DnrJ_EryC1
CMS1
CARD_2
P-loop_SecA
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
AIC88626
LinkDB
All DBs
Position
1:3826749..3828197
Genome browser
AA seq
482 aa
AA seq
DB search
MSFASLGLAEPLVRAVNELGYTQPTPIQAQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLHAFYAENRGARRAVRALILTPTRELAAQVEESVRAYSKYVKLRSTVMFGGVSINPQI
DALKRGVDIVVATPGRLLDHMQQKTIDVSSLDILVLDEADRMLDMGFIHDIKRVLAKLPA
KRQNLLFSATFSDEIKSLADSLLDSPALIEVARRNTTAETIAQKIHPVDRDRKRELLTHL
IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALSEFKNCTLQVL
VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGANGEAVSLVCVDEKQLLRD
IERLIKREISQEVIPGFEPDPNAKPEPIQRRGQRGGNGGGANGGNGGGSAGNAGRGNRAP
RAASQPQAQQGQPAARRDGGTQAKAAKPQARGGGRPAGNGASNGGGAHANRNRSSRSGQR
GR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgcatctctcggtctcgccgaaccgctcgtgcgggccgtcaacgagctgggc
tatacgcagcccacgccaatccaggctcaggccattcccgccgtactgggcggcggcgat
cttctcgccggcgcgcagacgggcaccggcaagaccgccggcttcacgctgccgatcctg
caacgcctgcacgcgttctacgcggaaaaccgcggcgcgcgccgcgcggtgcgcgcgctc
atcctcacgccgacgcgcgagctcgccgcgcaagtcgaggaaagcgtgcgcgcgtacagc
aagtacgtgaagctgcgctcgaccgtgatgttcggcggcgtcagcatcaatccgcagatc
gacgcgttgaagcgcggcgtcgacatcgtcgtcgcgacgccggggcgcctgctcgatcac
atgcagcagaagacgatcgacgtatcgagcctcgacatcctcgtgctcgacgaagccgac
cggatgctcgacatgggcttcatccacgacatcaagcgcgtgctcgcgaagctgccggcg
aagcgccagaacctgctgttctcggccaccttctccgacgagatcaagtcgctcgcggac
agcctgctcgattcgcccgcgctgatcgaggtcgcgcgccgcaacacgacggccgagacg
atcgcgcagaagatccacccggtcgatcgcgatcgcaagcgcgaactgctcacgcatctg
atccgcgagcacaactggttccaggtgctcgtgttcacgcgcacgaagcacggcgcgaac
cggctggccgagcaactgacgaaggacggcatcagcgcgatggcgatccacggcaacaag
agccagtcggcgcgcacgcgcgcgctgtccgagttcaagaactgcacgctgcaggtgctc
gtcgcgaccgacatcgccgcgcgcgggatcgatatcgatcaattgccgcacgtcgtgaac
ttcgatctgccgaacgtccccgaggactacgtgcaccgaatcggccgcaccggccgcgcg
ggcgcgaacggcgaggcggtgtcgctcgtgtgcgtcgacgaaaagcagttgctgcgcgac
atcgaacggctcatcaagcgcgagatttcgcaggaagtgatcccgggcttcgagccggac
ccgaacgcgaagccggagccgatccagcggcgcgggcagcgcggcggtaacggcggcggc
gctaacggcggtaacggcggcggtagcgcaggaaacgccggccgcggcaatcgcgcaccg
cgcgcggcgagccagccgcaggcgcagcagggtcagcccgccgcgcggcgagacggcggc
acgcaggcaaaggccgccaagccgcaggcacgcggcggcggacggccggcgggcaatggc
gcttcgaacggcggcggcgcgcatgcgaaccgcaaccgttcgtcgcgcagcggccagcgc
ggccgctga
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