Burkholderia thailandensis USAMRU Malaysia #20: BTRA_4165
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Entry
BTRA_4165 CDS
T03391
Name
(GenBank) sigma-70, region 4 family protein
KO
K19666
LuxR family transcriptional regulator, quorum-sensing system regulator SolR
Organism
bthm
Burkholderia thailandensis USAMRU Malaysia #20
Pathway
bthm02020
Two-component system
bthm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bthm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BTRA_4165
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BTRA_4165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bthm03000
]
BTRA_4165
Transcription factors [BR:
bthm03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
BTRA_4165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4
Sigma70_r4_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AIC89423
LinkDB
All DBs
Position
2:904166..904885
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AA seq
239 aa
AA seq
DB search
MELRWQDAYLQFSAAENEQQLFQQIAAYTKRLGFEYCCYGIRVPLPISKPVVAIFDTYPN
GWMERYQEMNYLEVDPTVRDGALSSNMIVWPEASANDATTLWSDARDHGLAVGVAQSSWA
SRGVFGLLTIARHTDRLTSAEINHLTLQANWLANMSHSLMSRFLVPKLAPESGVALTHRE
REVLCWTGEGKTACEIGQILSISERTVNFHVNNILDKLGATNKVQAVVKAIAMGLIDTP
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcgctggcaagacgcctatcttcaatttagcgccgcggagaacgagcagcag
ctcttccaacagatcgcagcgtatacgaagcggctcggcttcgaatattgctgctatggc
atacgtgtgccgctgccgatctcgaagccggtcgtcgcgatcttcgacacctatccgaac
ggctggatggagcgctatcaggaaatgaactacctggaggtcgatccgaccgtgcgcgac
ggcgcgctcagctcgaacatgatcgtctggccggaggcgagcgcgaacgatgcgacgacg
ctgtggagcgacgcgcgcgatcacgggctcgcagtcggcgtcgcgcagtcgagctgggca
tcgcgcggtgtgttcggcctcctgacgatcgcgcggcacacggaccgcctgacgtccgcc
gagatcaaccatctgacgcttcaggcgaactggctcgcgaacatgtcgcactcgttgatg
agccgcttcctcgtgccgaagctcgcgcccgaatcgggcgtggcgctcacgcaccgcgag
cgggaagtgctgtgctggacgggcgagggcaagaccgcgtgcgagatcggccagatcctc
agcatttccgagcgcacggtgaacttccacgtcaacaacatcctcgacaagctcggcgcg
acgaacaaggtgcaggccgtcgtgaaggcgatcgcgatggggctcatcgatacgccgtga
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