Burkholderia thailandensis USAMRU Malaysia #20: BTRA_4830
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Entry
BTRA_4830 CDS
T03391
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bthm
Burkholderia thailandensis USAMRU Malaysia #20
Pathway
bthm00100
Steroid biosynthesis
bthm00909
Sesquiterpenoid and triterpenoid biosynthesis
bthm01100
Metabolic pathways
bthm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bthm00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
BTRA_4830
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
BTRA_4830
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bthm01006
]
BTRA_4830
Enzymes [BR:
bthm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
BTRA_4830
Prenyltransferases [BR:
bthm01006
]
Terpene biosynthesis
Squalene/phytoene synthase
BTRA_4830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AIC91254
LinkDB
All DBs
Position
2:complement(1763673..1764722)
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AA seq
349 aa
AA seq
DB search
MGNSTRAFLLGPLLKGVSRSFYLTLRVLPEGMRDPIGLAYLLARAADTIADTSLIPPAQR
LELLLSLRAQINGVPDPQALARIAGEVAGQQTQSDEKTLLESLGPALAVLSQLSAFDRAA
VRGVVTTLTEGMEFDLRTFPDESSGRIVALREWPQLDRYTYLVAGCVGEFWTRMTCAHLP
GLLSEREDTMAERGIRFGKALQMTNVLRDCGKDLRIGRCYLPQAMLSEYGLCAEDLLRPD
ASPRARPLMHALVRTTLEHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLQTLALLASNDA
WLDPARASKVRRGDVYRIIAYSLPLAMSNRALRAWLDRLIADVEARLAA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgggcaactccacccgggcctttctgctgggccctttgctgaagggggtctcgcgctcc
ttctatctgacgctgcgcgtgctgccggaaggcatgcgcgatccgatcggcctcgcgtac
ctgctcgctcgcgcggccgacacgatcgccgacacgtcgctgattccgcccgcgcagcgg
ctcgaactgctgctgtcgctgcgcgcgcagatcaacggcgtgcccgatccgcaagcgctc
gcgcggatcgcgggcgaggtcgcggggcagcagacgcagtcggacgagaaaacgctgctc
gaatcgctcggccccgcgctcgcggtgctgtcgcaattgagcgcgttcgatcgcgccgcg
gtgcgcggcgtcgtcacgacgctcaccgaagggatggaattcgatttgcgcacgttcccg
gacgaatcgtcgggccgcatcgtcgcgctgcgcgaatggccgcagctcgatcgctacacg
tacctcgtcgccggctgcgtcggcgagttctggacgaggatgacgtgcgcgcatctgccc
ggcctgctgagcgagcgcgaggacacgatggccgagcgcggcatccgtttcggcaaggcg
ctgcagatgaccaacgtgctgcgcgactgcggcaaggatctgcggatcggccgctgctat
ctgccgcaggcgatgctgagcgaatacgggctgtgcgcggaagacctgttgcggccggac
gcttcgccgcgcgcgcggccgctgatgcatgcgctcgtgcgcacgacgctcgagcatttc
cgcgcgggcatcgactacacgttcgcgattccgcgccgcgcgccgcgcctgcggcttgcc
tgcttctggccgatcgcgatcggcctgcagacgctcgcgctgctcgcgtcgaacgacgcg
tggctcgatccggcgcgcgcgtcgaaggtgcggcgcggcgacgtctaccggatcatcgcg
tattcgctgccgctcgcgatgtcgaaccgcgcgttgcgcgcgtggctcgaccgcctgatc
gcggacgtcgaggctcggctcgcggcgtga
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