Burkholderia thailandensis USAMRU Malaysia #20: BTRA_5130
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Entry
BTRA_5130 CDS
T03391
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
bthm
Burkholderia thailandensis USAMRU Malaysia #20
Pathway
bthm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BTRA_5130 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bthm03400
]
BTRA_5130 (uvrA)
DNA repair and recombination proteins [BR:
bthm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BTRA_5130 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BTRA_5130 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
AAA_29
AAA_21
SMC_N
AAA_16
nSTAND1
AAA_33
RsgA_GTPase
AAA_22
AAA_25
AAA_23
NACHT
AAA_18
Viral_helicase1
UvrA_DNA-bind
ATPase
DnaJ_CXXCXGXG
DUF4350
RNA12
Motif
Other DBs
NCBI-ProteinID:
AIC90631
LinkDB
All DBs
Position
2:2109763..2115678
Genome browser
AA seq
1971 aa
AA seq
DB search
MSSSNLIRIRGARQHNLKHIDLDLRTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETF
SAYARQFLDRMDRPQVERVDGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLYARAAE
LFDRRTARLVRHDTPETIYADLLARTKEHDPRIAITFAVELPETATDDEVEQWLSASGYT
RVQARREVASPTGPRKVLDVVADRFRLHQVDKARAIEAIEASLKRGGGRVNVYVLAQVPE
NANDAAAQSQVWRYSTGLHDPDSDLRYADPQAALFSFNSAYGACEACRGFGRVIGVDLGL
VIPDARKTLRGGAIKPMQTPAWKECQDDLMRYAAKANIRRDTPWAELTPDEQDWVINGSP
DWNGKWQSQWYGVKRFFGYLESKAYKMHIRVLLSKYRSYTPCAVCGGARLKTESLLWRLG
TKANADAVLASADRFMPRGVEWTRAQLEALPGLTVHDLMLLPIERIRRFFDDVSLPSALL
DDALKLLLAEVRTRLKYLCDVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLTKTLFVL
DEPSIGLHPRDLNRIVEAMQRLRDAGNTLVVVEHDPSVMLAADRLIDMGPGPGERGGTIV
YDGTPGDIRSAHTLTGEYLGGRKQVAHASHWVRRPVDARTPRIVLEGASEHNLRDVTVEI
PLQRLVCVTGVSGSGKSTLLQDVLYPAMARHFGKATESPGAHRGLMGAEQVGDVVFVDQS
PIGKTTRSNPASYVGAFDEIRKLFAKAPLALQRGYGAGTFSFNSGDGRCPTCGGSGFEHI
EMQFLSDVYLRCPDCDGRRYRAEILDVRIERGGRALSVADVLELTVSEAAACFAADAEVL
RVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAESAKAGNGRRVVTQEARVARAR
LFMFDEPTTGLHFDDIAKLMRAFGKLLAAGHSLIVIEHNLDVIRAADWLIDLGPEGGDGG
GLVLCAGTPDDVKACAGSHTGAALLHYDRAMGAEAELAEQGAPLQAVLSAARARRAIEGE
DVVRIVNAREHNLKSLDVDIPHGKFNVVTGVSGSGKSTLAFDILFHEGQRRYLESLNAYA
RSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRLLYVKLGLQHCI
HDGAPVTSQTVESIVAQLLRDHRGEHVGLLAPLVVNRKGVYTDLAKWAKARGNTHLRVDG
EFVTVDPWPKLDRFREHTIELPVADLVVSPENEAGLRQRLDETLELGKGVMHLLAPLDGL
SHAMANRLSTARVGEIKVLSVKRACPVCGTSYPELDPRMFSYNSKHGWCATCVGTGLALT
REQRAAYDDTVLAEDGRGREQALPSDEQEPEGVGDEPCPDCGGTRLNPSARAVTFDRHSI
VDVAQWTVSDTRRWIDGLRLAGRDAQIARDIVGEIGSRLAFLEEVGLGYLSLDRAAPSLS
GGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNQILLDALRKLGDKGNTLVVVEHDE
DTIRRADHIIDIGPGAGKRGGALVAQGGVADLSAQPASVTGRLLAQPMTHPLQPRRSVNP
PGKRNGPAVPQTWLTVHGALLHNLRGVTVGIPLARLVAVTGVSGSGKSTLARDVLMTNLL
DAVGRSVLSSPATRRARKAAQQQAPQAAQVTKGRASVLARSAPRPALNVTHAWQGCESIS
GWEQIDRVLEVDQTPIGKTPRSCPATYIGVWDTIRRLFADTLEARARGYTASRFSFNTGE
GRCPACEGQGVRTIGMSFLPDVKVPCDVCHGQRFNPETLAVTWRGRNIGDVLTMEIDEAV
EFFAPISNIAHPLQLMKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDDITRRGQK
APHTLYVLDEPTVGLHMADVAKLIRVLHRLVDAGHSVVVIEHDLDVIAEADWIIDLGPEG
GAGGGAIVAAAPPEALVKAGASHTGRALEPVLARTGVNYREPVQGGEAEVG
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatccagcaatctgatccgcattcgcggagcgcgtcagcacaatctcaagcatatc
gatctcgatttgcgcaccggcgaaatgacggtcgtcaccggcccgtcgggctccggcaag
tcgagtctcgtgttcgacactttgtacgcggaggggcagcggcgctacgtcgagacgttc
agcgcgtatgcgcggcagtttctcgaccggatggaccggccgcaagtggagcgcgtcgac
ggcgtgccgcccgcgattgcgatcgaccagacgaaccccgttcgcagctcgcgctcgact
gtcggcacgatgaccgagctcaacgatcatctgaagctcctctacgcgcgcgcggccgaa
ctgttcgaccgccggaccgcgcggctggtgcggcacgacacgccggagacgatctacgcg
gatctccttgctcgcacgaaggagcacgacccgcgcatcgcgatcacgttcgccgtcgaa
ctgccggaaaccgcgaccgacgacgaagtcgagcagtggctgtcggcgagcggctatacg
cgcgtgcaggcgcggcgcgaagtggcgtcgcccaccgggccgcgcaaggtgctcgacgtg
gtggccgaccgcttccggctgcatcaggtcgacaaggcgcgcgcgatcgaggcgatcgag
gcgtcgctgaagcgcggcggcgggcgggtgaatgtctacgtgctcgcgcaggtgccggaa
aacgcgaacgacgcagccgcgcagtctcaggtgtggcgttattccaccgggcttcatgac
ccggacagcgatctgcgctacgcggacccgcaggcggcgctgttctcgttcaactcggcg
tacggcgcgtgcgaggcctgccgtggtttcggccgcgtgatcggcgtcgatctcggcctc
gtgattcccgacgcgcgcaagacgctgcgcggcggcgcgatcaagccgatgcagacgccc
gcctggaaggaatgccaggacgatctgatgcgctacgcggcgaaggcgaacatccggcgc
gatacgccgtgggccgagctgacgcccgacgagcaggactgggtgatcaacggctcgccg
gactggaacggcaagtggcagagccagtggtacggtgtgaagcgcttcttcggctatctc
gaatcgaaagcgtacaagatgcacatccgcgtgctgctgtcgaaataccgcagctacacg
ccgtgcgcggtgtgcggcggcgcgcgcctgaagacggaatcgctgctgtggcggctcggc
acgaaggcgaacgccgacgcggtgctcgcgagcgccgatcgcttcatgccgcgcggcgtc
gagtggacccgcgcgcagctcgaggcgctgccgggcctgacggtgcacgatctgatgctg
ctgccgatcgagcgcattcgccgcttcttcgacgacgtcagcctgccgagcgcgctgctc
gacgatgcgctgaagctgctgctcgccgaggtgcgcacgcggctgaagtatctgtgcgac
gtggggttgggctacctgacgctcgaccggcagagccgcacgctgtcgggcggcgaagtg
cagcggatcaacctgacgacggcgctcggcacgtcgctcacgaagacgctgttcgtgctc
gacgagccgagcatcgggctgcatccgcgcgacctgaaccggatcgtcgaggcgatgcag
cgcctgcgcgacgcgggcaatacgctcgtcgtcgtcgagcacgatccttcggtgatgctc
gcggccgaccggctgatcgacatgggccccggcccgggcgagcgcggcggcacgatcgtc
tacgacggcacgcccggcgacattcgctcggcgcacacgctgacgggcgagtatctcggc
ggccgcaagcaggtcgcgcacgcgtcgcactgggtgcgccggccggtggacgcgcgcacg
ccgcgcatcgtgctcgagggcgcgagcgagcacaacctgcgcgacgtgacagtcgagatt
ccgttgcagcgtctcgtctgcgtgacgggcgtgtcgggttccggcaaatcgacgttgttg
caggacgtgctctatccggcgatggcgcggcacttcggcaaggccaccgagtcgccgggc
gcgcaccgcggcctcatgggcgcggagcaggtgggcgatgtcgtgttcgtcgatcaatcg
ccgatcggcaagaccacgcgctcgaacccggcgagctatgtcggcgcgttcgacgagatc
cgcaagctgttcgcgaaggcgccgctcgcgctgcaacgcggctacggcgcgggcaccttc
agcttcaactcgggcgacggccgctgcccgacatgcggcggctccggcttcgagcacatc
gagatgcagttcctgagcgacgtctatctgcgttgcccggactgcgacggccggcgctac
cgggccgagattctcgacgtgcggatcgagcgcggcggccgcgcgctcagcgtcgccgac
gtgctcgagctgaccgtcagcgaagccgcggcgtgcttcgccgccgacgccgaggtgctg
cgcgtgctgcaaccgatcgtcgacgtcgggctcgaatacgtgaagctcggccagccggtg
ccgacgttgtcgggcggcgaggcgcagcggctgaagctggcgggttttctcgccgagtcc
gcgaaggccggcaacgggcgccgtgtcgtcacgcaagaggcgcgcgtcgcgcgcgcgcgt
ctgttcatgtttgacgaaccgaccacggggctgcacttcgacgacatcgcgaagctgatg
cgggcgttcggcaagctgctcgcggcaggccattcgctgatcgtgatcgagcacaatctc
gacgtgatccgcgcggccgactggctgatcgatcttggcccggaaggcggcgacggcggc
ggcctcgtgctgtgcgcgggcacgcccgacgatgtgaaggcatgcgccggatcgcatacc
ggcgcggcgctgctgcactacgaccgtgcaatgggcgccgaggcggagctcgccgagcag
ggcgcgccgttgcaggccgtgttgagcgcggcgcgcgcgcggcgggcgatcgaaggcgag
gatgtcgtgcggatcgtcaatgcgcgcgagcacaacctgaagtcgctcgacgtcgacatt
cctcacggcaagttcaacgtggtgaccggcgtgtccggctccggcaagtcgacgctcgcg
ttcgacatcctctttcacgaaggccagcgccgctacctcgaatcgctgaacgcctacgcg
cgctcgatcgtgcagcccgcgggccgccccgaagtcgacgcggtgtacggcattccgccg
acggtggcgatcgagcagcggctctcgcgcggcggccgcaagagcacggtcgcgacgacg
tccgaagtgtggcacttcctgcggctgctgtatgtgaagctcggccttcagcattgcatt
catgacggcgcgccggtgacgtcgcaaaccgtcgaatcgatcgtcgcgcaattgctgcgc
gatcatcgcggcgagcatgtcgggctgctcgcgccgctcgtcgtcaatcgcaagggcgtg
tacacggatctcgcgaagtgggcgaaggcgcgcggcaatacgcatctgcgcgtcgacggc
gagttcgtgacggtggacccgtggccgaagctcgatcgtttccgcgagcatacgatcgag
ctgccggtggccgacctcgtcgtgtcgccggagaacgaggccgggctgaggcagcgcctc
gacgagacgctcgagctcggcaagggcgtgatgcatctgctcgcgccgctcgacggcctg
agtcatgcgatggccaaccgcctttccaccgcgcgcgtcggcgagatcaaggtgctgtcg
gtcaagcgcgcgtgcccggtgtgcggcacgagctacccggagctggacccgcgaatgttc
tcgtacaacagcaagcacggctggtgcgcgacctgcgtgggcaccggcctcgcgctcacg
cgcgagcagcgcgcggcctacgacgacacggtgctcgccgaagacggccgcggccgcgag
caggcgctgccttccgacgagcaggaaccggaaggcgtcggcgacgagccgtgcccggat
tgcggcggcacgcgtctgaatccgtccgcgcgcgcggtgacgttcgatcgccattcgatc
gtcgacgtcgcgcaatggaccgtgtcggatacgcgccgctggatcgacggcctgcggctt
gccgggcgggacgcgcagatcgcgcgggacatcgtcggcgaaatcggcagccgcctcgcg
tttctcgaggaagtcgggctcggctacctgagcctcgatcgcgcggcgcctagcctgtcg
ggcggcgaggcccagcgcatccggctcgcggcgcagctcggcagcaacctgcagggcgtg
tgctacgtgctcgacgagccgacgatcggcctgcatccgcgcgacaaccagatcctgctg
gacgcgctgcgcaagctcggcgacaagggcaatacgctcgtcgtcgtcgaacacgacgaa
gacacgattcgccgcgccgatcacatcatcgacatcggcccgggcgccggcaagcgcggc
ggcgcgctggtcgcgcagggcggggtggccgatctgtccgcgcagcccgcatcggtgacg
gggcgcttgctcgcccaaccgatgacgcatccgttgcagccgcgccgcagcgtgaatccg
ccgggcaagcgcaacgggccggcggtgccgcagacctggctgacggtgcacggcgcactg
ctgcataacctgcgcggcgtcacggtcggcattccgctcgcgcggctcgtcgcggtgacg
ggcgtgagcggctcgggcaagtcgacgctcgcgcgcgatgtgctgatgacgaacctgctc
gacgcggtgggccgctcggtgctgtcgtcgccggccacgcggcgcgcgcgcaaggccgcg
cagcagcaggcgccgcaggcggcacaggtgacgaagggccgcgcgagcgtgctggcgcgc
agcgcgccgaggcctgcgctgaacgtcacgcatgcgtggcagggctgcgagtcgatcagc
ggctgggagcagatcgaccgcgtgctcgaagtcgatcagacgccgatcggcaagacgccg
cgctcgtgcccggcgacctacatcggcgtgtgggacacgatccgcaggctgttcgcggac
acgctggaggcgcgcgcccgcggctatacggcgtcgcgattctcgttcaacaccggcgaa
gggcgctgccccgcgtgcgaagggcagggcgtgcgcacgatcggcatgagtttcctgccc
gacgtgaaggtgccgtgcgatgtgtgccacgggcagcgcttcaatccggagacgctcgcg
gtgacgtggcgcggccggaacatcggcgacgtgctgacgatggagatcgacgaagcggtg
gagttcttcgcgccgatctcgaacatcgcgcacccgctgcaactgatgaaggacgtcggc
ctgggttacctgacgctcggccagccgtcgccgaccttgtccggcggcgaggcgcagcgc
atcaagctcgtcaccgagctcagcaaggtgcgcgacgacatcacgcggcgcgggcagaag
gcgccgcacacgctgtacgtgctggacgagccgaccgtgggcctgcacatggcggatgtc
gcgaagctgattcgcgtgctgcaccggctcgtggatgcggggcacagtgtcgtcgtgatc
gagcacgacctcgatgtgatcgcggaagcggactggatcatcgacctcggcccggagggc
ggcgccggaggcggcgcgatcgtggcggccgcgcctccggaagcgctcgtgaaggcgggc
gcaagccatacggggcgcgcgctcgagccggtgctggcgcgaacgggcgtgaactatcgc
gagcccgtgcagggcggggaggcggaagtcggctga
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integrated database retrieval system
