Burkholderia thailandensis USAMRU Malaysia #20: BTRA_5234
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Entry
BTRA_5234 CDS
T03391
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
bthm
Burkholderia thailandensis USAMRU Malaysia #20
Pathway
bthm02020
Two-component system
bthm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bthm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BTRA_5234
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BTRA_5234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bthm03021
]
BTRA_5234
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bthm02035
]
BTRA_5234
Transcription machinery [BR:
bthm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BTRA_5234
Bacterial motility proteins [BR:
bthm02035
]
Flagellar system
Flagellar assembly proteins
Stator
BTRA_5234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AIC89286
LinkDB
All DBs
Position
2:2247003..2247713
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AA seq
236 aa
AA seq
DB search
MTTLDECAAARTAYARAGAGAEQRWLVEYAPIVKRAARQLKSQAVGMLTLDDIEQIGLMG
LLEALRRYGMPDAAFPCYAATRVRGAILDELRRHDWRPRSVRLEAHRTRDCERELCRSLG
REPTEAEVSSALGISTAEYRERVMANNAEAMASFDSVLDDDALTHEESPERQIVRRRCLE
QALARLNEREQRVIQLYYEFDLSLREIASVLELTEARVCQINKAALKKMREVLSDA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgacgacactggacgaatgcgctgccgcgcgcacggcttacgcgcgcgccggagcgggc
gcggagcagagatggctggtcgagtacgcgccgatcgtcaagcgcgccgcccgccagttg
aagtcgcaggcagtcggcatgctgacgctcgatgacatcgagcagatcggcttgatgggg
ctgctcgaggcgctgcgccgctatggcatgcccgatgcggctttcccatgctacgcggcg
acgcgcgtgcgcggcgcgattctcgacgagttgcgccgtcacgactggcggccgcgctcg
gtgcgcctggaagcgcatcgcacgcgcgactgcgaacgcgagctgtgccgctcgcttgga
cgcgagccgacggaagccgaggtcagcagtgcgctcggcatcagcacggcggagtaccgc
gaacgcgtgatggcgaacaatgcggaggcaatggcgagcttcgacagcgtgctcgacgac
gacgcgttgacccatgaagaaagccccgaaaggcagatcgtgcggcgtcgctgtctcgag
caggccctggctcgcctcaacgagcgcgagcagcgtgtgattcagctgtactacgagttc
gatttgagcctgcgcgaaatcgcgtcggttctcgagttgaccgaggcgcgggtttgccag
atcaacaaggcggccctcaagaagatgcgcgaggtgttgagcgatgcatga
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