Burkholderia thailandensis USAMRU Malaysia #20: BTRA_5372
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Entry
BTRA_5372 CDS
T03391
Name
(GenBank) bacterial regulatory helix-turn-helix , lysR family protein
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
bthm
Burkholderia thailandensis USAMRU Malaysia #20
Brite
KEGG Orthology (KO) [BR:
bthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bthm03000
]
BTRA_5372
Transcription factors [BR:
bthm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BTRA_5372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
AIC89122
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Position
2:2415227..2416105
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AA seq
292 aa
AA seq
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MLNFRHLYYFWVVVKEGGFARAAGRLDMAVQTISAQVRELERSIGHQLLKPAGRGVTMTD
AGQAAFARAEEIFRIGQLIEDEVREAARGEGVRLAVGLTDGISKLTAHAVLEPALAAPSL
RLLCHDGEYEALLGELALHRLDLVLAGEPAPRRANLRLASERIVASPVDWYGPTAIASAA
RGRFPQCLAKLPVLLPTGHAALRARLDRWFDAHGIRPRIVGEFEDSALMAVFAARGLGVF
PLSEPGAGDLALLRGLRRLGRADGVTEEIYAIRSHRGQHHPLVAQVLAAARD
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgctgaattttcgccatttgtactacttctgggtggtcgtgaaggaaggcggcttcgcg
cgcgcggccggccggctcgacatggccgtgcagacgatcagcgcgcaggtgcgcgagctg
gagcgatcgatcgggcaccagttgctgaagccggcgggccgcggcgtgacgatgacggac
gccgggcaggccgcgttcgcgcgcgccgaggagatcttccggatcggtcaactgatcgag
gacgaggtgcgcgaggcggcgcgcggcgagggcgtgcggctcgcggtcggcctgacggac
ggcatctcgaagctcaccgcgcacgcggtgctcgagcccgcgctcgcggcgccgtcgctg
cggctgctgtgccacgacggcgagtacgaggcactgctcggcgagctcgcgctgcatcgg
ctcgatctcgtgctcgcgggcgagccggcgccgcgtcgcgcgaacctgcggctcgcgagc
gagcggatcgtcgcgtcgcccgtcgactggtacgggccgacggcgatcgcatcagccgcg
cgcggtcgctttccgcagtgcctggccaagctgccggtgctgttgccgaccgggcacgcg
gcactgcgcgcgcggctcgaccgctggttcgacgcgcatggtatccggccgcggatcgtc
ggcgagttcgaggatagcgcgctgatggccgtgttcgccgcgcgcgggcttggcgtgttt
ccgttgagcgagcccggcgcgggcgatctcgcgctgctgcgcgggctgcggcggctcggc
cgcgcggacggcgtgaccgaggagatctacgcgatccggtcgcatcgcggccagcatcat
ccgctcgtcgcgcaggtgctggccgcggcgcgtgactga
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