Burkholderia thailandensis USAMRU Malaysia #20: BTRA_5662
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Entry
BTRA_5662 CDS
T03391
Symbol
polA
Name
(GenBank) DNA polymerase I family protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bthm
Burkholderia thailandensis USAMRU Malaysia #20
Pathway
bthm03030
DNA replication
bthm03410
Base excision repair
bthm03420
Nucleotide excision repair
bthm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BTRA_5662 (polA)
03410 Base excision repair
BTRA_5662 (polA)
03420 Nucleotide excision repair
BTRA_5662 (polA)
03440 Homologous recombination
BTRA_5662 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bthm03032
]
BTRA_5662 (polA)
03400 DNA repair and recombination proteins [BR:
bthm03400
]
BTRA_5662 (polA)
Enzymes [BR:
bthm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BTRA_5662 (polA)
DNA replication proteins [BR:
bthm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BTRA_5662 (polA)
DNA repair and recombination proteins [BR:
bthm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BTRA_5662 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BTRA_5662 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AIC90050
LinkDB
All DBs
Position
2:2732944..2735724
Genome browser
AA seq
926 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKDVSAEY
SACVFDAKGKTFRDDLYADYKAHRPPMPPDLALQIEPIHSAVRALGWPLLMIEGVEADDV
IGTLAKRAEQHGMNVIVSTGDKDLAQLVTDRVTLINTMTNEALDRDGVLAKFGVPPERIV
DYLSLIGDTVDNVPGVEKCGPKTAVKWLTQYGSLDGVVEHAGEIKGVVGDNLRRALDFLP
LARKLVTVETACELAPHVESFDASLATDGEGRDALREIFSTYGFKTWLRELDSEPAANGA
AAAAAMAGAAQDPAGGAPAELPLAMARDYMTVQTWEQFDAWLAKISAAELTAFDTETTSL
DPMLAQIVGLSFSVEPGHAAYVPVAHRGPDMPAQLPRDEVLAKLTPWLEDASKKKLGQHL
KYDAQVLANYGIALNGIEHDTLLESYVLESHRTHDMDSLALRHLGVRTIKYEDVAGKGAQ
QIGFDEVPLEQASEYAAEDADITLQLHHALYPQIAREPGLARVYRDIEMPVSLVLRKMER
TGVLIDSDRLGRQSSEIATRLIELEQQAYGLAGGEFNLGSPKQIGQIFFERLQLPVVKKT
PSGAPSTDEEVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPNTGRVHTNYAQA
VAVTGRLASNDPNLQNIPVRTAEGRRIREAFIAPPGSKIVSADYSQIELRIMAHISEDES
LLRAFAHGEDIHRATAAEVFGVTPLEVTSDQRRIAKVINFGLIYGMSSFGLASNLGITRD
AAKLYIDRYFLRYPGVARYMEETRARAKEKGYVETVFGRRLWLPEINGGNGPRRQAAERA
AINAPMQGTAADLIKLSMIAVDDWLERGGLRARMIMQVHDELVLEVPESELSIVREKLPE
MMCGVAKLKVPLVAEVGAGENWEEAH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcaagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgcggccctggcggggagccgaccgga
gcgctctacggaatcatcaatatgctgcgccgcatgcgcaaggatgtcagtgcagagtat
agcgcgtgcgtgttcgacgccaagggcaaaactttccgcgatgatctgtacgccgattac
aaggcgcaccgcccgccgatgccgcccgatctcgcgctgcagatcgagccgatccactcg
gccgtgcgcgcgctcggctggccgctcctgatgatcgagggcgtcgaggccgacgacgtg
atcggcacgctcgcgaagcgggccgaacagcacggcatgaacgtgatcgtatcgacgggc
gacaaggacctcgcgcaactcgtcaccgatcgcgtcacgctcatcaacacgatgacgaac
gaggcgctcgatcgcgacggcgtgcttgcgaagttcggcgtgccgccggagcggatcgtc
gattacctgtcgctcatcggcgacaccgtcgacaatgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtcaagtggctgacgcagtacggctccctcgacggcgtcgtcgagcat
gccggcgagatcaagggcgtcgtcggcgacaacctgcgccgcgcgctcgatttcctgccg
ctcgctcgcaagctcgtaacggtcgagacggcgtgcgagctcgcgccgcacgtcgaatcg
ttcgacgcgtcgctcgcgacggacggcgagggccgcgacgcgctgcgcgagatcttctcg
acgtacggcttcaagacgtggctgcgcgagctcgacagcgagcccgccgcgaacggcgcg
gccgccgcggccgctatggccggcgcggcgcaagacccggcgggcggcgcgccggccgag
ctgccgcttgcgatggcgcgcgattacatgaccgtgcagacgtgggagcagttcgacgcg
tggctcgcgaagatttccgcggccgagctgaccgcgttcgataccgagacgacgtcgctc
gatccgatgctcgcgcaaatcgtcggcctgtcgttctcggtggagccgggccacgccgcg
tacgtgccggtcgcgcatcgcggccccgacatgcccgcgcaactgccgcgcgacgaggtg
ctcgcgaagctcacgccgtggctcgaggatgcgagcaagaagaagctcggccagcatctg
aaatacgatgcgcaggtgctcgcgaactacgggatcgcgctgaacggcatcgagcacgac
acgctgctcgagtcgtacgtgctcgaatcgcaccgcacgcacgacatggacagtctcgcg
ctgcgccatctcggcgtgaggacgatcaagtacgaggatgtcgcgggcaagggcgcgcag
cagatcggcttcgacgaggtgccgctcgagcaggcgtccgaatatgcggccgaggacgcg
gacatcacgctgcagctgcatcacgcgctgtatccgcagatcgcgcgcgagccgggtctc
gcgcgcgtgtatcgcgacatcgagatgccggtgtcgctcgtgctgcgcaagatggagcgc
accggcgtgctgatcgacagcgaccggctgggccgtcagagcagcgagatcgcgacgcgg
ctcatcgagctcgagcagcaggcgtacgggcttgcgggcggcgaattcaatctcggctcg
ccgaagcagatcggccagatcttcttcgagcggctgcaactgcccgtcgtcaagaagacg
ccgagcggcgcgccgtcgaccgacgaagaggtgctgcaaaagctagccgaggactatccg
ctgcccaagctgctgctcgagcatcgcggcttgtcgaagctgaagtcgacctacaccgac
aagctgccgcgaatggtcaacccgaacacgggccgcgtgcacacgaactatgcgcaggcg
gtggcggtcacggggcggctcgcttcgaatgatccgaacctgcagaacattccggtgcgc
acggcggaagggcggcgcatccgcgaggcgttcatcgcgccgccgggcagcaagatcgtg
tcggccgactattcgcagatcgaactgcgcatcatggcgcacatttccgaggacgagtcg
ctgctgcgcgcgttcgcgcacggcgaggacattcaccgcgcgaccgcggccgaggtgttc
ggcgtgacgccgctcgaagtgacgtccgatcagcggcgcatcgcgaaggtgatcaacttc
ggcctgatctatggaatgagctcgttcggcctcgcgtctaatctcggcatcacgcgggat
gcggcgaagctctacatcgaccgctacttccttcgctatccgggcgttgcccgctacatg
gaggaaacgcgcgcgcgcgcgaaggagaagggctacgtcgagacggtgttcggccgccgc
ctgtggctgcccgagatcaacggcggcaacgggccgcgccggcaggccgccgagcgcgcg
gcgatcaacgcgccgatgcagggcacggccgccgatctgatcaagctgtcgatgatcgcg
gtcgacgactggctcgaacgcggcggcttgcgcgcgcggatgatcatgcaggtgcacgac
gaactcgtgctcgaggtgccggaaagcgaactgtcgatcgtgcgcgagaagctgcccgag
atgatgtgcggcgtcgcgaaactgaaggtgccgctcgtcgccgaggtcggcgcgggcgag
aactgggaagaggcgcactga
DBGET
integrated database retrieval system
