Bacteroides thetaiotaomicron 7330: Btheta7330_00353
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Entry
Btheta7330_00353 CDS
T04540
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
btho
Bacteroides thetaiotaomicron 7330
Pathway
btho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
btho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Btheta7330_00353 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btho03021
]
Btheta7330_00353 (rpoC)
03400 DNA repair and recombination proteins [BR:
btho03400
]
Btheta7330_00353 (rpoC)
Enzymes [BR:
btho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Btheta7330_00353 (rpoC)
Transcription machinery [BR:
btho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Btheta7330_00353 (rpoC)
DNA repair and recombination proteins [BR:
btho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Btheta7330_00353 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ALJ39944
UniProt:
A0A0P0FAB1
LinkDB
All DBs
Position
506459..510742
Genome browser
AA seq
1427 aa
AA seq
DB search
MAFRKENKTKSNFSKISIGLASPEEILENSSGEVLKPETINYRTYKPERDGLFCERIFGP
IKDYECHCGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHIQLVVPVAHIWYFRSLPNKI
GYLLGLPTKKLDSIIYYERYVVIQPGVKAEDGIAEYDLLSEEEYLDILDTLPKDNQYLED
NDPNKFIAKMGAEAIYDLLARLDLDALSYELRHRAGNDASQQRKNEALKRLQVVESFRAS
RGRNKPEWMIVRIVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIKAP
EVILRNEKRMLQESVDSLFDNSRKSSAVKTDANRPLKSLSDSLKGKQGRFRQNLLGKRVD
YSARSVIVVGPELKMGECGIPKLMAAELYKPFIIRKLIERGIVKTVKSAKKIVDRKEAVI
WDILEHVMKGHPVLLNRAPTLHRLGIQAFQPKMIEGKAIQLHPLACTAFNADFDGDQMAV
HLPLSNEAILEAQMLMLQSHNILNPANGAPITVPAQDMVLGLYYITKLRAGAKGEGLTFY
GPEEALIAYNEGKVDIHAPVKVIVKDVDENGNIVDVMRETSVGRVIVNEIVPPEAGYINT
IISKKSLRDIISDVIKVCGVAKAADFLDGIKNLGYQMAFKGGLSFNLGDIIIPKEKETLV
QKGYDEVEQVVNNYNMGFITNNERYNQVIDIWTHVNSELSNILMKTISSDDQGFNSVYMM
LDSGARGSKEQIRQLSGMRGLMAKPQKAGAEGGQIIENPILSNFKEGLSVLEYFISTHGA
RKGLADTALKTADAGYLTRRLVDVSHDVIITEEDCGTLRGLVCTDLKNNDEVIATLYERI
LGRVSVHDIIHPTTGELLVAGGEEITEEVAKKIQDSPIESVEIRSVLTCEAKKGVCAKCY
GRNLATSRMVQKGEAVGVIAAQSIGEPGTQLTLRTFHAGGTAANIAANASIVAKNSARLE
FEELRTVDIVDEMGEAAKVVVGRLAEVRFVDVNTGIVLSTHNVPYGSTLYVSDGDLVEKG
KLIAKWDPFNAVIITEATGKIEFEGVIENVTYKVESDEATGLREIIIIESKDKTKVPSAH
ILTEDGDLIRTYNLPVGGHVIIENGQKVKAGEVIVKIPRAVGKAGDITGGLPRVTELFEA
RNPSNPAVVSEIDGEVTMGKIKRGNREIIVTSKTGEVKKYLVALSKQILVQENDYVRAGT
PLSDGATTPADILAIKGPTAVQEYIVNEVQDVYRLQGVKINDKHFEIIVRQMMRKVQIDE
PGDTRFLEQQVVDKLEFMEENDRIWGKKVVVDAGDSQNMQPGQIVTARKLRDENSMLKRR
DLKPVEVRDAVAATSTQILQGITRAALQTSSFMSAASFQETTKVLNEAAINGKTDKLEGM
KENVICGHLIPAGTGQREFEKIIVGSKEEYDRILANKKTVLDYNEVE
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggcttttagaaaagaaaataagacgaaaagcaatttctcgaagatctcaattggtctg
gcttctccggaagaaatcctagagaattcgagtggtgaagttttgaagcctgaaaccata
aattaccgtacgtacaaacccgaacgcgatggtttgttctgcgagcgcatttttggtcct
attaaggattacgaatgccattgcggtaaatataagcgtatccgttataaaggtatcgtc
tgcgaccgttgtggtgtagaagttacagaaaagaaagtacgccgtgaacgtatgggacat
atacagttggtggtgccggtggcacacatctggtatttccgttcgcttccaaataagatc
ggttatttgctcggactgccgacaaagaagctggattcgattatatattacgaacgttat
gttgttattcagccgggtgtaaaggctgaagatggcattgccgaatatgatttactttct
gaagaagaatatctggatattctggatacacttccgaaggacaatcaatatctggaggat
aatgatccgaataagttcatcgctaagatgggagctgaagcaatttatgatttgctggct
cgtttggatctggatgctctgtcttatgaattgcgtcaccgtgcaggcaatgatgcttca
cagcaacgtaagaatgaggcattgaaacgtcttcaggttgtagaatcgttccgtgcatca
cgtggacgtaacaagccggaatggatgattgtacgtatcgtaccggttattccgcccgaa
ctccgtccattggttccattggatggtggtcgttttgctacttccgacttgaatgacctt
tatcgtcgtgttatcattcgtaacaaccgtctgaagagattgatcgaaatcaaagctccg
gaagtaatcttgcgtaatgagaaacgtatgcttcaggaatctgtagactcattgttcgat
aattcacgtaaatcaagtgcagtgaagacggatgctaaccgcccgttgaaatcactgtct
gatagcttgaaaggtaaacaaggacgtttccgtcagaacttgctgggtaaacgtgttgac
tactctgcacgttcggtaattgtcgttggtccggaactgaagatgggtgagtgcggtatt
cctaaattgatggctgccgaactttataagccgtttattatccgtaaactcattgaacgt
ggtatcgttaagacggtgaaatctgcaaagaagattgtagatcgtaaggaagctgtgatc
tgggatattctggaacacgtaatgaaaggacatcctgtactgttgaaccgtgctccgaca
ttgcaccgtttgggtatccaggcattccagccgaagatgattgaaggtaaagctatccag
ttgcacccgttggcatgtacggcattcaacgccgacttcgacggtgaccagatggctgtt
cacttgcctttgagtaacgaagcaattcttgaagctcagatgttgatgcttcagtcacat
aatatcctgaatccggcaaacggtgcgcctattactgtacctgcacaggatatggttctt
ggtttgtattacattaccaagttgcgtgccggtgctaagggagaaggacttacattctac
ggaccggaagaagcattaatcgcttataatgaaggtaaggtagatattcatgctccggta
aaggtgatcgtgaaagacgttgatgaaaatggtaacattgttgacgttatgcgtgaaact
tctgtaggacgtgtgattgttaatgaaattgttcctcctgaagcaggttatatcaatacg
attatttctaagaaatctcttcgtgatatcattagtgatgtaatcaaggtttgtggtgtg
gctaaagctgcagacttcttggatggaatcaagaacttaggttaccaaatggcctttaag
ggtggtttgtcattcaacttgggtgatattattatcccgaaagaaaaagagacattggta
caaaaaggttacgacgaagttgaacaagtcgtaaacaactataatatgggtttcattacc
aacaacgaacgttataatcaggtaattgatatctggacacatgtgaactctgagttgtct
aacatcttgatgaaaactatttcttcggatgatcaaggatttaactctgtatacatgatg
ctggattcgggtgcccgtggttctaaagaacagattcgtcagttgtccggtatgcgtggt
ttgatggctaagccccagaaagctggtgctgaaggtggtcagattattgaaaacccgatc
ttgtcaaactttaaagagggactttctgtgttggagtactttatctctactcacggtgcc
cgtaaaggtttggcggataccgctttgaagactgccgatgccggatatttgactcgtcgt
ctggtagacgtttctcacgacgtgatcatcacggaagaagactgcggtacacttcgtgga
ttggtttgtacagacttgaagaataacgatgaagtaatcgctaccctgtatgaacgtatc
ttagggcgtgtttctgtacatgatattattcatcctactacaggcgaattacttgttgcc
ggtggtgaagaaatcacagaagaagttgctaagaagattcaggattctccgattgaaagc
gttgaaatccgttctgtattgacttgtgaagcgaagaagggtgtttgtgctaagtgttac
ggacgtaacctggcaacaagccgcatggttcagaagggtgaggctgtcggtgtaattgct
gctcagtcaatcggtgagccgggtacacagttgacattgcgtacattccacgccggtggt
actgctgcgaatattgcggcaaatgcaagtattgtggctaagaacagtgctcgtctggaa
tttgaagaacttcgtacggtagatatcgtagacgaaatgggtgaagctgcaaaagtagtg
gtaggccgtttggctgaagttcgttttgtggacgtaaatactggtatcgttctttctacg
cacaatgtaccttatggttctacattatatgtatcggatggtgatctggttgaaaagggt
aagttaattgctaaatgggacccgttcaatgccgttattataactgaagcaactggtaag
attgaattcgaaggtgtaattgagaatgttacttataaggtggaatcggatgaagcaacc
ggtcttcgtgaaatcatcattattgaatctaaggataaaacgaaagttccttcggctcat
atcctgacagaagacggtgatctgattcgtacttataacttaccggtaggtggtcacgtg
attattgaaaatggtcagaaagtgaaagccggtgaagtaatcgtgaagattccgcgtgct
gtaggtaaggcgggtgacatcacgggtggtcttcctcgtgttactgagttgtttgaagca
cgtaatccgtctaatcctgctgtcgtttctgaaattgacggtgaggttacaatgggtaag
atcaagcgtggtaaccgtgaaatcatcgtaacttcgaaaacaggtgaagtgaagaagtat
cttgttgcattgtccaaacagattctggttcaggagaacgactatgtgcgtgctggtact
ccattatctgatggtgctactactccggctgatatcctggcaattaaaggtcctacggct
gtacaggaatatattgtgaatgaagttcaggatgtataccgtctgcagggtgtgaagatc
aatgataagcattttgagattatcgttcgccagatgatgcgtaaggttcagatcgatgag
ccgggtgatactcgcttcttggaacaacaggtagtggataagcttgagtttatggaggaa
aacgatcgtatctggggtaagaaagtggttgttgatgcaggtgattctcagaatatgcag
ccgggacagattgtgactgctcgtaagttgcgtgatgagaacagtatgctgaagcgccgt
gacttgaaacctgttgaggtacgtgatgctgtagctgcaacttcgactcagattcttcag
ggtattacgcgtgctgcactgcagacttcaagctttatgtcagctgcatccttccaggaa
acaacgaaggtgttgaatgaggctgctatcaatggcaagacagataaacttgaaggaatg
aaggaaaacgtaatttgcggtcacttaattccggcaggtacaggtcagcgtgaatttgaa
aagattatcgttggttcaaaagaagagtatgatcgtatcttggcgaacaagaagacagta
cttgattacaatgaagtagaataa
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