Bacteroides thetaiotaomicron 7330: Btheta7330_01121
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Entry
Btheta7330_01121 CDS
T04540
Symbol
helD
Name
(GenBank) Helicase IV
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
btho
Bacteroides thetaiotaomicron 7330
Pathway
btho03420
Nucleotide excision repair
btho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
btho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Btheta7330_01121 (helD)
03430 Mismatch repair
Btheta7330_01121 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btho03400
]
Btheta7330_01121 (helD)
Enzymes [BR:
btho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Btheta7330_01121 (helD)
DNA repair and recombination proteins [BR:
btho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Btheta7330_01121 (helD)
MMR (mismatch excision repair)
Other MMR factors
Btheta7330_01121 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
Viral_helicase1
AAA_19
DEAD
AAA_30
CUL7_CUL9_N
AAA_14
SLFN-g3_helicase
ResIII
NPHP3_N
NACHT
nSTAND3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ALJ40696
LinkDB
All DBs
Position
complement(1441931..1443991)
Genome browser
AA seq
686 aa
AA seq
DB search
MIFNETEEQEKAYLQQVLNTIHDTINSTDKSVKEHIDTLQEYKDYLWSNKDIDPHEIRSM
RESILNHFARGENVIDKRNRLSKILDIPYFGRIDFKENGSGSKKLPVYIGIHTFYDFKNK
RNLIYDWRAPISGMFYDYESGEATYSSPSGEVRGEISLKRQYRIRKGKMEYMIESSVTVH
DDILQKELCSNADDKMKNIVMTIQREQNRIIRNEDTPVLIIQGVAGSGKTSIALHRIAYL
LYAQKGKISSKDILIISPNKVFADYISNVLPELGETTVPETSMEQILSTVLDNKYKYQNF
FGQVSELLEQPAPDFIERIQYKASFEFVSRLDKFILHMENHYFRATDVKLTKYITIPAEF
VGEQFKRFHRYPIRQRFETMTDYILEMMKIQYNLTVTTAEKNLLRKEIKNMFSGNNDLQI
YKDFFEWAGKPEMFKMRKNRMLEYADMAPLAYLHLALDGNRTQTHIRHLLIDEMQDYSPI
QYKVIQKLYPCRKTILGDASQSVNPYGSSTAAMIQKAFTTGEVMKLCKSYRSTFEITSLA
QKIQANNELEPIMRHGEQPEIFPFKNAEEETTGIVNLVSDFRNSGYTSLGIICKTETQAK
ALAQKLQVHTDNISFLSSLSSAYTKGIVVTSAHMAKGLEFDEVIVPQADNQNYHSTIDKS
MLYVAVTRAMHKITLTYSGIPNRFIE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgatattcaacgaaacagaagagcaggaaaaagcatatttgcaacaggtgctcaatacc
atccatgatacgataaacagcacggacaagtctgttaaagagcacatagatactctgcag
gaatacaaagattatctatggtccaataaagacatcgatcctcatgagatccgttccatg
cgtgaaagtatactgaatcattttgcacgaggcgaaaatgtgatagacaaacgcaatcgc
ctaagtaagatattggatattccttacttcggacgaatcgattttaaggaaaatggaagc
ggcagcaaaaaacttcctgtatatataggtatccatacattctatgatttcaaaaacaaa
agaaatctgatatatgattggcgggcacctatttcgggtatgttttatgattatgaatca
ggtgaggccacttattcttccccttcaggcgaagtgcgtggagagatttcactcaagcgt
cagtaccgcattcgcaaaggtaagatggaatatatgattgaaagttccgtcactgttcat
gatgatatcctgcaaaaagagctctgttccaatgcagacgacaagatgaaaaacatcgtt
atgaccatccaacgcgaacaaaaccggattatccgtaacgaagatacgcctgtactcatc
atacagggagtcgccggctcgggaaaaacgtctattgccttacaccgtattgcttacttg
ctctatgcacaaaaaggaaaaatttcatccaaagatattctgatcatctcacctaataaa
gtatttgccgattacatatccaatgtccttccggaacttggtgaaacgactgtaccggaa
accagcatggaacagattctctccaccgtcctcgataacaaatataagtatcagaatttc
ttcggacaagtttcggaactactggaacagccggctccggattttatcgaacggatacaa
tacaaagcttctttcgaatttgtttcccgactcgacaaattcatcctccatatggaaaat
cactatttcagagcgactgatgtaaaactcaccaagtatatcactattcccgcagaattc
gtaggggaacagttcaaacgattccatcgttaccccatacgccaacgatttgaaaccatg
acagattacattctggaaatgatgaaaatccagtataaccttacagtgactaccgctgag
aaaaatctgctgagaaaagaaattaagaatatgttttcaggaaataacgacctccagatc
tataaagactttttcgaatgggccggaaaacctgaaatgttcaagatgcgaaagaatcgt
atgctggaatatgcagatatggctcccctggcttatctgcacctcgcattggatggaaat
agaactcaaactcatatcaggcatcttctgatagatgaaatgcaggactattctcccata
caatacaaggtgatccaaaaactttatccctgccggaaaacaattcttggagatgcttct
caatctgtcaatccctatggttcttcaactgctgccatgattcaaaaagcgtttaccacc
ggagaagtaatgaaactatgtaagagttaccgctctacttttgaaattaccagtctggcg
cagaaaattcaggcaaacaatgaactggaacccattatgcgacatggagaacaacctgaa
atttttccattcaagaatgcagaagaagaaacgacaggcattgttaatttggtatcggac
ttcagaaactccggatatacatctttgggaataatctgtaaaacagaaactcaggcaaaa
gcgcttgctcagaaactccaagtccatacagataacatatcgtttttgtcaagtctaagt
tcagcttatacaaaaggcattgttgtcacttccgcacacatggcaaaagggttggaattt
gatgaagtgatcgttccacaagctgataatcagaattatcattccaccatagataaaagt
atgctttatgtggcggtgacaagggcgatgcataaaatcacattgacctatagcgggata
cccaatcggttcatcgaataa
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