Bacteroides thetaiotaomicron 7330: Btheta7330_01126
Help
Entry
Btheta7330_01126 CDS
T04540
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
btho
Bacteroides thetaiotaomicron 7330
Pathway
btho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Btheta7330_01126 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btho03019
]
Btheta7330_01126 (rhlE)
Enzymes [BR:
btho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Btheta7330_01126 (rhlE)
Messenger RNA biogenesis [BR:
btho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Btheta7330_01126 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ALJ40701
UniProt:
A0A0P0FIE3
LinkDB
All DBs
Position
1447649..1448773
Genome browser
AA seq
374 aa
AA seq
DB search
MTFKELNITEPILKAIEEKGYTVPTPIQEKAIPVALAKKDILGCAQTGTGKTASFAIPII
QHLHLNKGEGKRSGIKALILTPTRELALQISECIEDYSKYTRIRHGVIFGGVNQRPQVDM
LHKGIDILVATPGRLLDLMNQGHIRLDNIQYFVLDEADRMLDMGFIHDIKRILPKLPKEK
QTLFFSATMPDTIIALTNSLLKNPVKIYVTPKSSTVDSIKQLVYFVEKKEKSLLLISILQ
KTEDRSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVMVA
TDIASRGIDINELPLVINYDLPDVPETYVHRIGRTGRAGNAGTALTFCSQEERKLINDIQ
KLTGKKLNRADFTI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaaagaattaaatataaccgaacctattttaaaagcaattgaagaaaaagga
tatacagtacctactcctattcaggagaaagcgattcctgtagcattggcaaaaaaagac
attttaggctgtgcgcagactggaaccggaaagactgcttcttttgcaatacctattata
caacatttgcatctcaataagggagaaggcaagcgttcgggaatcaaagctctgattttg
actcctacccgcgagctcgcattgcaaatcagtgaatgtattgaagattattcaaagtat
acacgtatccgtcacggagtcatcttcggaggcgtgaatcaacgtccgcaagtggatatg
ctgcataaaggaattgatattctggttgctactccggggcgtctgctcgatttgatgaat
caaggacatatacgattggataatattcagtattttgttctggacgaagcagaccgtatg
cttgatatgggctttattcatgatattaaacggatattgccgaagcttccgaaagaaaaa
caaacgttgttcttttcggctacgatgcctgatacgattattgctctgactaattccttg
ttgaagaatccggtgaagatttatgttacaccgaaatcatcaacggtagattctataaag
cagttggtttactttgtagagaagaaagaaaagagcctgttgctgatttcaattttgcaa
aaaacggaggaccggtcggtacttatcttttcgcgtaccaagcataatgctgataagata
gttaaaatattgggtaaagccggcattggcagccaggctattcatggaaataagagtcag
gcggcacggcagtccgcattgggtaacttcaagtcgggtaagacgcgagtgatggttgcc
actgatatcgcttcccggggaattgatattaatgaactgccgttggttatcaattatgat
cttcctgatgttcccgagacatatgtacaccgaatcgggcgtacgggaagagctggaaat
gcaggtacggcacttacattctgctctcaggaagaacgcaaattgattaatgatattcag
aaattgacaggcaaaaaactaaatagggctgattttacaatttaa
DBGET
integrated database retrieval system
