Bacteroides thetaiotaomicron 7330: Btheta7330_03679
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Entry
Btheta7330_03679 CDS
T04540
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
btho
Bacteroides thetaiotaomicron 7330
Pathway
btho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Btheta7330_03679 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btho03019
]
Btheta7330_03679 (rny)
Messenger RNA biogenesis [BR:
btho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Btheta7330_03679 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
ALJ43210
UniProt:
A0A0P0FD59
LinkDB
All DBs
Position
4528961..4530496
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AA seq
511 aa
AA seq
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MIAIIATAIACFVVGGILSYVLFRYVLKSKYDSVLKDAETEAEVIKKNKLLEVKEKFLNK
KADLEKEVALRNQKIQQAENKLKQREMVLSQRQEEIQRKKLEAEAVKENLEAQLVIVDKK
KEELDKLQHQEIEKLEAISGLSADEAKERLVESLKEEAKTQAQSFINDIMDDAKLTASKE
AKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVSKVRKQVEEEIIETGKRTTID
LGIHGLHPELIRIIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHD
IGKVPDEEPELPHALLGMKLAEKYKEKPDICNAIGAHHDETEMTSLLAPIVQVCDAISGA
RPGARREIVEAYIKRLNDLEQLAMAYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaataatagcaacagcaattgcttgcttcgtcgtaggaggaatcctttcatac
gtactgttccggtacgtgttgaagtccaagtacgacagtgtcctgaaagatgcggagaca
gaagctgaagtaattaagaaaaacaaattgctggaagtaaaggaaaaattcctgaacaag
aaagctgatttggagaaggaagtggcactgcgtaatcaaaagattcagcaggcggaaaat
aaactgaaacaacgtgaaatggtgctcagccagcgtcaggaagaaatccaacgcaaaaag
ctggaagccgaagccgtaaaggaaaacctggaggcgcaacttgttatcgttgacaaaaag
aaggaagaactggacaaactgcaacatcaggaaatagaaaaactggaagcaatctccggt
ctgtctgccgacgaagcaaaagaacgtctggtcgaatcactgaaagaagaagctaaaacg
caggcacagtcgtttatcaacgacatcatggatgatgccaaactgactgccagcaaagaa
gctaaacggatcgttatccagtctatccaacgggtagctaccgaaactgccatcgaaaac
tccgtaacggtattccatatcgaatcggacgaaatcaaaggacgtatcatcggacgtgaa
ggacgcaatatccgtgcactggaagccgctaccggcgttgaaatcgttgtagacgacact
ccggaagcaatcgttctttccgcttttgacccggttcgccgtgaaattgcccgtctggct
cttcaccaactggtgacagacggacgtatccatccggcacgtatcgaggaagtggtgtcc
aaagtacgcaaacaggtagaggaagaaattatcgaaaccggtaaacggacaacaatcgac
cttggtatccacggtctgcatccggaactgatccgtatcatcggtaagatgaaatatcgc
tcttcttatggtcagaacttgttgcaacacgcccgtgaaacagccaatctctgtgctgtg
atggcatcggaactgggactgaacccgaagaaggcaaaacgtgcaggtttgctgcatgat
atcggtaaagtgcccgatgaagaaccggaattgccgcacgcattgctgggtatgaaactt
gccgagaaatacaaagaaaaaccggatatctgcaatgctatcggtgctcaccacgacgaa
acggaaatgaccagtctgctggctcctatcgtacaggtttgtgatgctatctccggtgca
cgtccgggcgcacgccgcgaaatcgtagaggcttacatcaaacgtctgaacgatcttgaa
caattggctatggcttatccgggtgtgaccaagacatacgctattcaggcaggacgcgaa
ctccgcgtgatcgtaggtgcggataagatcgatgacaagcagacagaaagcttgtccggt
gaaatcgccaagaagattcaggacgagatgacttatccgggacaggtgaagattaccgtt
atccgtgaaacacgtgcggttagcttcgctaaataa
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