Bacteroides thetaiotaomicron 7330: Btheta7330_04015
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Entry
Btheta7330_04015 CDS
T04540
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
btho
Bacteroides thetaiotaomicron 7330
Pathway
btho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
btho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Btheta7330_04015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btho03021
]
Btheta7330_04015
03400 DNA repair and recombination proteins [BR:
btho03400
]
Btheta7330_04015
Enzymes [BR:
btho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Btheta7330_04015
Transcription machinery [BR:
btho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Btheta7330_04015
DNA repair and recombination proteins [BR:
btho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Btheta7330_04015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
DUF3450
CC4_CEP85
SPESP1
Leu_zip
UPF0242
DUF1359
Mce4_CUP1
Golgin_A5
CENP-Q
EXOC6_Sec15_N
HHH_5
NAPRTase
Aminotran_3
ADIP
Motif
Other DBs
NCBI-ProteinID:
ALJ43543
UniProt:
A0A0P0F8Z6
LinkDB
All DBs
Position
4952306..4953040
Genome browser
AA seq
244 aa
AA seq
DB search
MNIDMLFCIVLMVLGAFLIYYPIKDESPRQKLKKLADSVASDKKDIDYLIQRFSYLLDNM
AADNGKGSALRCQIAKLEEVVKELNGKRKELELNNRSMTDVNDELKRSNAELLRKASELR
DEIQQQEIKIQQQEEYINSVQRVKEGLEIALDNIQAEEVHYLSQPIFSMKMTPIVRSKLE
SHGILYVGDLIQLNEEYLMEIWGLGPVALERIKTKLNENGVWFGMDVIRINDRWYRRKQE
LTTD
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagatatgcttttctgtatagtattgatggtattgggggctttcctcatatac
tatcccatcaaagatgaatcacctcggcaaaaactgaaaaagctcgccgattctgttgcg
tctgataaaaaggacattgattatctgattcaacgcttcagctaccttttggataacatg
gcggcagacaatgggaaaggttcggctctgagatgccagattgccaaattggaggaagtt
gtcaaggagttgaacggcaaacgcaaggaacttgagttaaacaaccggtcgatgacggat
gttaatgacgaattgaagcgaagcaatgccgaacttttaaggaaggcttctgaattgcgt
gatgagatacagcaacaggaaattaaaatccaacagcaggaagaatacatcaattctgtc
cagagagtcaaagaagggcttgagatagccttggacaacattcaggcagaagaggtgcat
tatctctcacagccgatattcagcatgaaaatgacgcctatagtcagaagcaaactcgaa
tctcatgggatattgtatgtcggcgacctgattcagctcaacgaggaatatctcatggaa
atctggggtttaggaccggtagcacttgaaagaataaagacgaaactgaacgaaaacggt
gtgtggttcggtatggatgtcatacgaatcaacgaccgttggtatcgtcggaaacaagaa
ttaacaacggattga
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integrated database retrieval system
