Bacteroides thetaiotaomicron 7330: Btheta7330_04422
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Entry
Btheta7330_04422 CDS
T04540
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
btho
Bacteroides thetaiotaomicron 7330
Pathway
btho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Btheta7330_04422 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btho03019
]
Btheta7330_04422 (pnp)
03016 Transfer RNA biogenesis [BR:
btho03016
]
Btheta7330_04422 (pnp)
Enzymes [BR:
btho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Btheta7330_04422 (pnp)
Messenger RNA biogenesis [BR:
btho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Btheta7330_04422 (pnp)
Transfer RNA biogenesis [BR:
btho03016
]
Prokaryotic type
tRNA degradation factors
Btheta7330_04422 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
RNase_II_C_S1
OB_cyt-4
ATP-cone
Motif
Other DBs
NCBI-ProteinID:
ALJ43948
UniProt:
A0A0P0FJC2
LinkDB
All DBs
Position
complement(5478989..5481115)
Genome browser
AA seq
708 aa
AA seq
DB search
MINPIVKTIELPDGRTITLETGKLAKQADGSVMLRMGNTMLLATVCAAKDAVPGTDFMPL
QVEYKEKFAAFGRFPGGFTKREGRASDYEILTCRLVDRALRPLFPDNYHAEVYVNIILFS
ADGVDMPDALAGLAASAALAVSDIPFNGPISEVRVARIDGQFVINPTFDQLEKADMDLMV
AATYDNIMMVEGEMHEVSEAELLEAMKVAHEAIKVHCKAQMELTEEVGKTVKREYNHEVN
DEELRKAVREACYDKAYAVAASGNNNKHERFDAFDAIREEFKAQFSEEELEEKAPLIDRY
YHDVEKEAMRRSILDEGKRLDGRKTTEIRPIWCEVGPLPGPHGSAIFTRGETQSLTSVTL
GTKLDEKIIDNVLEHGKERFLLHYNFPPFSTGEAKAQRGVGRREIGHGHLAWRALKGQIP
ADYPYVVRVVSEILESNGSSSMATVCAGTLALMDAGVKIKKPVSGIAMGLIKNPGEEKYA
VLSDILGDEDHLGDMDFKVTGTRDGITATQMDIKVDGLSYEILERALNQAKEGRMHILDK
ITETIAEPRADLKDHAPRIETMTIPKEFIGAVIGPGGKIIQGMQEETGAVITIEETDGMG
RIEVSGTNKKCIDDAMRMIKAIVAVPEVGEVYKGKVRSIMPYGAFIEFLPGKDGLLHISE
IDWKRLETVEEAGIKEGDEIEVKLIDIDPKTGKFKLSRKVLMPRPEKK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgattaacccaattgttaagacgatcgagttacctgatggaagaaccatcacactcgag
acgggaaagttggcaaaacaggcagacggttctgtaatgctacgcatgggaaacaccatg
ttattagctactgtttgtgccgctaaagatgcagttcccggaacagatttcatgcctttg
caggtagagtataaagaaaaatttgcggcattcggccgttttcctggtggcttcaccaag
agagaaggtagagcttccgattatgagattttgacttgtcgtctcgttgaccgcgctctc
cgcccactattccctgataattatcacgcagaagtatatgtaaatatcatccttttctct
gctgacggtgtagatatgccggatgcactggccggattggcagcttctgcagcactcgct
gtttcagatattcctttcaacggaccgatctcggaagtacgtgtagcacgtatcgacggt
cagtttgtaatcaatcctacttttgaccaactggaaaaagctgatatggacctgatggtt
gccgctacttatgataacatcatgatggtagaaggcgaaatgcacgaagtatctgaagct
gaactgctggaagcaatgaaggtagctcacgaagctatcaaagtgcattgcaaggctcag
atggagctgactgaagaagtaggcaagacagtgaaacgtgaatataaccatgaagtaaac
gatgaagaattgcgtaaggcagttcgtgaggcttgttatgacaaggcttatgcagtagct
gcttccggaaataacaacaagcacgaacgtttcgatgcttttgatgctatccgcgaagag
ttcaaggctcagttctctgaagaagaacttgaagaaaaagctccgctgatcgaccgttac
tatcatgatgtagaaaaagaagcgatgcgtcgttcaattcttgacgaaggcaagcgcctg
gatggtcgtaagactactgaaatccgcccgatctggtgtgaggttggtcctctgcccggt
cctcacggatctgctattttcactcgtggtgaaactcagtctctgacttctgtcactttg
ggtacgaagctcgacgaaaagattatcgacaatgtattggaacacggaaaagaacgtttc
ctgctgcactataacttccctcctttctctacaggcgaagcaaaagctcaacgtggtgta
ggccgtcgtgaaatcggtcacggtcacttggcttggcgtgccttgaaaggacagattcct
gctgactatccatacgtagtacgtgttgtttcggaaatcctcgaatctaacggttcttct
tctatggctaccgtatgtgccggaacattggcattgatggatgccggtgtgaagatcaag
aagccggtatcgggtattgctatgggactgatcaagaatccgggcgaagaaaaatatgct
gtattgtctgacatcctcggtgacgaagaccacctcggagatatggacttcaaggtaacc
ggaacaagagacggtatcactgctactcagatggatatcaaggtagacggtctgtcttac
gaaattctggaacgtgctttgaaccaggctaaagaaggacgtatgcacatcctcgacaag
atcaccgagacaatcgctgaaccgcgtgctgacctgaaagaccatgctcctcgcattgaa
acaatgactattcctaaagaatttatcggagctgtaatcggccctggtggaaaaatcatt
caaggtatgcaggaagagaccggtgctgttatcactatcgaagaaacagacggtatggga
cgcatcgaagtttccggaaccaacaagaaatgtattgatgatgcaatgcgcatgatcaaa
gcaatcgttgctgttcctgaagtaggcgaagtatataaaggtaaagttcgctctatcatg
ccttacggtgcattcattgaattcctgccgggtaaagacggtttgctgcacatttccgag
atcgactggaaacgtctggaaacagtggaagaagccggaatcaaggaaggtgatgagatc
gaagtgaaactgatcgacatcgatccgaagacaggaaaattcaaactttcaagaaaagta
ttgatgccaagaccggaaaagaagtaa
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