Bacillus thuringiensis serovar kurstaki YBT-1520: YBT1520_01160
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Entry
YBT1520_01160 CDS
T03435
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bthr
Bacillus thuringiensis serovar kurstaki YBT-1520
Pathway
bthr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bthr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YBT1520_01160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bthr03019
]
YBT1520_01160
03009 Ribosome biogenesis [BR:
bthr03009
]
YBT1520_01160
Enzymes [BR:
bthr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
YBT1520_01160
Messenger RNA biogenesis [BR:
bthr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
YBT1520_01160
Ribosome biogenesis [BR:
bthr03009
]
Prokaryotic type
rRNA helicases
YBT1520_01160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AHZ49007
LinkDB
All DBs
Position
227099..228676
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AA seq
525 aa
AA seq
DB search
MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL
LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKH
PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL
FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSP
ELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTK
RKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEMLEENDSVTVVAAALK
MMTKEPDTTPIALTSEPPVVSRGGGSKKRGGNGGGYRDGNRNRSRDARGGGDGRNRDRNR
DGRNRDGNRDRNRDGGSRGRRGEGQGRPGSSNGRGERKHHSRPQA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcgagaattaggattaagtgattctttactgcaatctgttgaaagtatg
ggctttgaagaggctacaccaattcaagctgaaacaattccacatgcattgcaaggtaaa
gatattattgggcaagcgcaaacaggtacagggaaaacagcagcattcggattaccacta
ttagataaagtggatacacataaagaatcggttcaaggtattgttatcgcgccaacgcgt
gaattagcaattcaagttggagaagaattatacaaaattggtaagcataaacgtgttcgc
attttaccaatttatggtggtcaagatattaaccgccaaattcgtgctctaaaaaaacac
ccacacattattgttggtacgccgggtcgtattttagatcatattaaccgtaaaacactt
cgcctgcaaaacgtagagacagttgttcttgacgaagcggatgaaatgttaaacatgggc
ttcattgaagacattgaagcaattttaacagatgtgccagaaacacatcaaacattacta
ttctcagcgacaatgccggatccaatccgccgtattgctgagcgtttcatgactgagcct
caacacattaaagtaaaagcaaaagaagtaacaatgccaaacattcagcagttctattta
gaagtgcaagaaaagaaaaagtttgacgtgttaacacgcttattagatattcaatctcca
gagcttgcaatcgtattcggtcgtacaaagcgtcgtgttgatgaattatcagaagcatta
aacttacgtggttatgctgcagaaggtattcacggtgatttaactcaggcgaaacgtatg
tctgtattacgtaaatttaaagaaggttctattgaagttcttgttgcaacagacgttgct
gcacgtggtcttgatatttcaggcgtaacgcacgtatataacttcgatattccacaagat
ccagaatcatacgttcaccgtatcggtcgtactggtcgtgcaggtaaaaaaggtattgca
atgctatttgtaacaccacgtgaatcaggacaattaaaaaatatcgagcgtacaacaaaa
cgtaaaatggaccgtatggatgcaccgacacttgacgaggcattagaaggtcaacaacgt
ttaatcgctgaaaagcttcaaagcacaattgaaaatgaaaacttagcatactacaagcgt
attgcagaagaaatgttagaagaaaatgactctgtaacagtagtagctgctgctttaaaa
atgatgactaaagagccggatacaactccgatcgctttaacatcagaaccacctgttgtt
tcaagaggcggcggttctaaaaaacgcggcggtaacggaggcggataccgtgatggtaac
cgtaatcgtagtcgtgatgcacgcggcggtggcgatggacgtaatcgtgaccgtaaccgt
gatggacgtaatcgtgacggaaaccgtgatcgcaatcgtgatggtggtagtcgtggtcgt
agaggtgaaggccaaggtcgccctggttcttcaaatggacgcggcgaaagaaaacatcat
agccgtccacaagcttaa
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