Bacillus thuringiensis serovar kurstaki YBT-1520: YBT1520_20080
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Entry
YBT1520_20080 CDS
T03435
Name
(GenBank) phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bthr
Bacillus thuringiensis serovar kurstaki YBT-1520
Pathway
bthr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bthr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YBT1520_20080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bthr03019
]
YBT1520_20080
Messenger RNA biogenesis [BR:
bthr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YBT1520_20080
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF4407
DUF2844
Golgin_A5
Motif
Other DBs
NCBI-ProteinID:
AHZ52618
LinkDB
All DBs
Position
complement(3875893..3877458)
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AA seq
521 aa
AA seq
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MSSTVWILISILLATTVGAVVGFFVRKSIAEAKINGAANEAKRILDEANREAEALKKEAL
LEAKDEIHTLRTEAELEIRDRRSELQKQENRLMQKEENLDRKDETLDKREQQLEKKEDSL
VARQQQIEELESKVGELVQKQQTELERISNLTREQAKAIILGKVENEVSHEIAVMVKESE
VRAKEEADKKAKEILSLAMQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETL
TGIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYI
REVGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSMEVAYLTGLMAAELGEDEK
LARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVL
VAAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRILVKPDTI
DDLEAHRLARDIRKRIENELDYPGHIKVTVIRETRAVEYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtacagtttggatactcatctccattttgcttgcaacaacagtcggtgcagtt
gttggcttttttgttcgaaagtctattgctgaagcgaagattaatggtgcggctaatgaa
gcgaaacgtattctagacgaagcgaatcgtgaggctgaagcacttaagaaagaagcgctt
ttagaagcaaaggatgaaattcatacacttcgtacagaagctgaattagaaattcgtgac
cgtagaagcgaattacaaaaacaagaaaatcgtttaatgcaaaaagaagagaaccttgat
cgtaaagacgaaacgctcgataaacgcgagcagcagttagagaagaaagaggattctctt
gtagcgagacaacaacagattgaagagttggaaagcaaagtgggagagttagttcaaaag
caacaaacggaattagagcgcatttccaatctgacacgcgaacaagcgaaagcaattatt
cttggtaaagtagaaaatgaagtttctcatgaaatcgctgttatggtaaaagaaagtgaa
gttcgcgcgaaagaagaagcggataagaaagcaaaagagattttatctcttgcaatgcaa
agatgtgcagctgatcatgttgctgaaacaaccgtttcggttgtaaatcttccaaatgac
gaaatgaagggacgtattatcgggcgtgaaggtcgtaatattcgtacgttagaaacgtta
acgggtattgacttaattatcgatgatacaccagaggcggtaatcctttctggattcgac
ccaattcgtcgtgaaacagctcgtatcgctcttgataaactagtacaggacggacgtatt
cacccagcgcgtattgaagagatggtcgaaaaatcaagacgtgaagtggacgagtatatt
cgcgaagtaggagagcaaacaacgtttgaagtgggtgttcatggattacatccagattta
attaaaattttaggtcgtttaaaataccgtacaagttatggtcaaaacgtcttaaaacac
tctatggaagttgcatatttaactggacttatggcggcagagcttggcgaggatgaaaaa
ctagcaagacgtgcaggtctattacatgatatcggaaaagcgattgaccatgaagtagaa
ggaagccacgttgaaattggtgttgaacttgcaacgaaatataaagagcatcctgtagtt
ataaacagtatcgcatctcaccatggtgacacagaaccaacttctatcattgcagtttta
gttgcagcagcagatgctttatcagctgcaagaccgggagctcgtagtgaaacacttgaa
aactatattcgtcgtcttgaaaagttagaagagatttcagagtcttatgaaggcgttgaa
aaatcatttgcaattcaagcaggacgtgaagttcgtattttggtaaaaccagatacaatc
gatgacttagaagctcatcgtttagctcgtgatatccgaaaacgtattgaaaatgaactg
gattacccaggacatattaaagtaactgttattcgtgaaacacgtgcagtggaatacgca
aaataa
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