Bacillus thuringiensis serovar kurstaki YBT-1520: YBT1520_20275
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Entry
YBT1520_20275 CDS
T03435
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bthr
Bacillus thuringiensis serovar kurstaki YBT-1520
Pathway
bthr03030
DNA replication
bthr03430
Mismatch repair
bthr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bthr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YBT1520_20275 (polC)
03430 Mismatch repair
YBT1520_20275 (polC)
03440 Homologous recombination
YBT1520_20275 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bthr03032
]
YBT1520_20275 (polC)
03400 DNA repair and recombination proteins [BR:
bthr03400
]
YBT1520_20275 (polC)
Enzymes [BR:
bthr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YBT1520_20275 (polC)
DNA replication proteins [BR:
bthr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YBT1520_20275 (polC)
DNA repair and recombination proteins [BR:
bthr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YBT1520_20275 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DEDDh_C
DUF1409
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AHZ52657
LinkDB
All DBs
Position
complement(3916657..3920958)
Genome browser
AA seq
1433 aa
AA seq
DB search
MSLTNEQQERFQILLQQLQIPDDLINQYLQGGGIERLVIDKANKSWHFDLQVPRILPTEL
YELLETKLKQSFSHIARTTFALETENKQFTEEEVRAYWPLCTERITFSPMFAYLKKQLPQ
VNGVKLLINVNNELESTALKKNVAKPVGDQYEVFGFPRFQLDTHIQQNTEEMQKFREQTQ
QEDRERVIQAMEEMAKKQAEESSVVYEGPITLGYLIKPDEEITPMREIQDEERRKTVQGY
VFHVETKELRSGRTLLTLKITDYTDSIMIKMFSRDKEDIPMLQSLKKGMWVKARGSVQND
TFVRDLVMIANDINEITGPSRKDKAPEGEKRVELHLHTPMSQMDAVTPVSKLVAQAGKWG
HEAIAVTDHAVAQSFPEAYSAGKKAGVKVIYGVEANLVNDGVPIAYNEAHRLLAEETYVV
FDVETTGLSAVYDTVIELAAVKVKGGEIIDRFESFANPHQPLSATIIELTGITDDMLTDA
PEVDEVFKKFEEWMGDHTLVAHNASFDMGFINVGFKKAGLEKTNNPVIDTLELARFLFPE
MKNHRLNTMCKKLDIELTQHHRAIYDTEATGYLLVKMLKDVIEKGFEYHDQLNDSMGQGD
AYKRGRPSHMTLLATSDVGLKNLYKLVSYSHLNYFYRVPRVPRSLLKKYREGILVGTACD
KGEVFEAMMQKAPEEVEEIAQFYDYIEVMPPEVLRHLVERELVRDEGQLKTIISNLVKLG
ETLDKPVVATGNVHYLDPEDAMYRKILVSSQGGANPLNRHSLPPVHFRTTDEMLECFSFL
GEDKAKEVVVTNTQKIASLIGDVHPVKDDLYTPKIEGADDETRDMSYKMARSIYGEELPE
IVEARLEKELKSIIGHGFAVIYLISHKLVKKSLVDGYLVGSRGSVGSSFVATMMEITEVN
PLPPHYVCPKCKQSEFFNDGSVGSGFDLPDKECPACNIPYVKDGHDIPFETFLGFKGDKV
PDIDLNFSGEYQPRAHNYTKVLFGEDYVYRAGTIGTVAEKTAYGYVKGYANDHNLTIRNA
EIDRLVAGCTGVKRTTGQHPGGIIVVPDYMDIFDFSPIQYPADSIGAEWRTTHFDFHSIH
DNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFSGPESLGVTEEQINCKTG
TLGIPEFGTKFVRQMLEETKPTTFSELVQISGLSHGTDVWLGNANELIYNGTCTLSEVIG
CRDDIMVYLIYQGLDPSLAFKIMESVRKGKGVPEEWEEDMKNNNVPDWYIDSCKKIKYMF
PKAHAAAYVLMAVRIAYFKVHFALLFYAAYFTVRADDFDVEAMAKGSASIRARIDEIAQK
GLDAAPKEKSLLTVLEMTLEMCERGYSFQKVDLYRSHATEFIIDGDTLIPPFNAVPGLGT
NAALSIVEARKNGDFLSKEDLQQRSKVSKTIIEYLDSQGCLGDLPDQNQLSLF
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaacaaatgaacaacaagagcgatttcaaattttgctccagcagttgcaaata
ccagacgaccttataaatcaatatttacaaggcggtggtattgaaaggctcgttattgat
aaagcgaataaaagttggcattttgatttacaagtgccacgtattttgcctacagaatta
tatgaattgctagaaacaaagcttaagcaatcattttctcatattgcaagaacaacattt
gcattagaaacagagaataaacaatttacagaagaagaagtgagggcgtattggccgctt
tgtacggaacgaattacattttcacctatgttcgcatacttaaagaagcagcttccacag
gtgaatggagtgaagttgttaataaatgtaaataacgagctggagtctacggctttaaag
aaaaacgttgcgaaaccagtaggggatcaatacgaagtttttggattcccgcgttttcag
ttagacacacatatacagcaaaatacagaagaaatgcaaaagtttcgtgaacaaacgcag
caagaagaccgtgagcgtgttatacaagctatggaagaaatggcgaagaagcaagctgaa
gaaagcagcgttgtgtatgaaggaccgattacactcgggtatcttattaagccagatgaa
gagattacaccgatgcgagaaattcaagatgaagaaagaagaaaaacggttcaaggatat
gtcttccatgtagaaacaaaagagcttcgtagtgggcgtacgttattaactttaaaaata
acggattatacggattctattatgatcaaaatgttctcgcgtgacaaagaagatattcca
atgctgcaatccttgaaaaaaggaatgtgggtgaaagcgcgtggttctgttcaaaacgat
acattcgttcgagatttagtaatgattgcaaatgatattaatgaaataacaggaccgtct
cgtaaagataaagcaccagaaggcgaaaaacgagtagagctgcatctccatactccgatg
agtcaaatggacgctgtcactccagtttctaagcttgttgctcaagctggtaaatgggga
catgaggctattgcggttacagatcatgccgtggctcagtccttcccagaggcgtattct
gcagggaagaaggctggtgttaaagttatatatggtgtagaagcaaatctagttaatgat
ggtgtaccgatagcgtataacgaagcgcatcgtttacttgcagaggaaacgtatgttgtt
ttcgacgttgagacgacaggtttatcagctgtatacgatacagtcattgagttggctgcc
gtaaaagtaaagggtggcgaaattattgatcgctttgaatctttcgcaaatccacatcaa
ccattatcagcgacgattattgaattgacaggtattacggatgatatgttaactgatgca
cctgaagtggacgaagtgtttaaaaagtttgaggaatggatgggcgaccatacacttgtt
gcccataacgcgagctttgatatgggctttattaacgtaggttttaaaaaggctggacta
gaaaaaacgaataatccagttattgatacgttagaacttgcacgatttttattcccagaa
atgaaaaatcatcgattaaatacgatgtgtaaaaaacttgatattgaattaacacaacat
caccgtgcgatttatgatacagaagcgacgggatatttacttgtgaaaatgttgaaagac
gtaattgaaaagggatttgaatatcacgatcaattaaatgatagcatgggacaaggggat
gcgtataagcgtggccgtccaagtcatatgacgttacttgccacatcagatgttggattg
aaaaatttatataaacttgtttcatattctcaccttaattacttttaccgtgtaccacgt
gtgccgagatcactattaaaaaaatatcgtgaagggattttagtaggaacggcttgtgat
aaaggtgaagtgtttgaggcaatgatgcaaaaggcacctgaagaggtagaagaaattgcc
cagttctatgattacattgaagtaatgcctccagaggtgttgcgtcatttagtagaacgt
gagcttgttcgagacgaaggtcaattaaaaacaattatttctaacttagtaaaactaggt
gagacgttagataaaccagttgttgctacaggaaacgtgcattatttagaccctgaggat
gcgatgtatcgtaaaattttagtcagttcgcagggcggagccaatccgttaaatcgacat
tcattaccgccagtacatttccgtacaactgatgagatgttagaatgtttttcattctta
ggtgaagacaaagcgaaagaagttgttgtaacaaatacacaaaagattgcgtcattaatt
ggtgatgtgcatccagtaaaagacgatctatacacaccgaaaattgaaggtgctgatgat
gaaacgcgtgatatgagttataaaatggcgcgtagcatttatggtgaagagttaccggaa
attgtagaagcacgtttagaaaaagaattaaaaagtattattgggcatggattcgccgta
atttatttaatttcacataagcttgtgaaaaaatcgttagtagacggatatctagtaggt
tcgcgtggatcggtagggtcatcatttgttgcaacgatgatggaaattacagaagtaaac
ccattaccaccacactatgtatgtccgaagtgtaagcaatcagaattctttaatgatggt
tctgtaggttctggttttgacttaccagataaagaatgtcctgcttgtaatattccatat
gtaaaagatggacatgacattcctttcgaaacgttccttggatttaaaggagataaggtg
cccgatatcgatttgaacttctccggggaataccaaccacgtgcccataactatacgaaa
gtactgttcggtgaagactatgtatatcgtgcaggaacgattggtacagttgcggaaaaa
actgcttacggatatgtaaaaggttatgcaaatgatcataacttaacgattcgaaatgca
gagattgatcgcttagtagcagggtgtaccggtgtaaaacgtacaacaggacagcatcca
ggcggtattatcgttgtgccagattacatggatatctttgatttctcaccaatacagtac
ccagctgattcaattggtgctgaatggagaacaacgcattttgatttccactcgattcat
gataatttattaaaacttgatatactaggacacgatgatccgaccgttattcgtatgtta
caagatttaagtggtattgatccgaaaacaatcccaacggatgatccagaagtaatgaaa
attttctctggtccagaatcgttaggggtaacggaagagcaaattaactgtaaaacaggt
acacttggtataccagagtttggtacaaaattcgtaagacagatgttagaagagacaaaa
ccgacgacattctcagagttagtccaaatttctggactatcacatggtactgacgtatgg
cttggtaatgcaaacgagttaatttataacggtacatgtacgctgagcgaagttatcggt
tgtcgtgatgacatcatggtatatttaatctatcaaggtctagatccatcattagccttc
aaaatcatggagtcggttcgtaaaggtaaaggtgtaccggaagaatgggaagaagacatg
aaaaataataatgtaccagattggtatattgattcatgtaagaagattaaatacatgttc
cctaaagcccatgcggctgcttacgtacttatggctgtacgtatcgcatactttaaagta
cattttgcactgttattctatgccgcatattttacagttcgtgcagatgattttgatgta
gaggcaatggcgaaaggttcagcatctatacgtgcaagaattgatgaaattgctcaaaag
ggactcgatgctgcgccgaaagagaagagtttattaacagtactagaaatgacacttgaa
atgtgtgagcgtggatactcattccaaaaggtggatttataccgctcacatgcaacagaa
tttattattgatggagacacattaattcctccatttaatgcggtacctggtcttggtaca
aacgcagctttaagtattgtggaagcacgtaaaaatggagacttcttatcaaaagaggac
ttgcagcagcgtagtaaggtttcgaaaacaattattgagtatttagatagtcaaggttgt
ttaggagatttaccggatcaaaaccagttatcactgttctag
DBGET
integrated database retrieval system
