Bacillus thuringiensis serovar kurstaki YBT-1520: YBT1520_20355
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Entry
YBT1520_20355 CDS
T03435
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bthr
Bacillus thuringiensis serovar kurstaki YBT-1520
Brite
KEGG Orthology (KO) [BR:
bthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bthr03032
]
YBT1520_20355
03400 DNA repair and recombination proteins [BR:
bthr03400
]
YBT1520_20355
Enzymes [BR:
bthr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
YBT1520_20355
DNA replication proteins [BR:
bthr03032
]
Prokaryotic type
DNA Topoisomerases
YBT1520_20355
DNA repair and recombination proteins [BR:
bthr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
YBT1520_20355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
SAND
Toprim_3
Toprim_2
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
AHZ52671
LinkDB
All DBs
Position
complement(3935567..3937645)
Genome browser
AA seq
692 aa
AA seq
DB search
MSDYLVIVESPSKAKTIEKYLGKKYKVVASMGHVRDLPKSQMGIEVKNNFTPKYITIRGK
GPVLKDLKSAAKKAKKVYLAADPDREGEAIAWHLANTLNVDVESDCRVVFNEITKDAIKE
SFKHPRAINMDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIERER
EIQNFEPEEFWTIKTEFVKGKDTFEASFYGVDGEKVQLTNETQVNEIIEQMKDNAFSVEN
VTRKERKRNPALPFTTSSLQQEAARKLNMRAKKTMMLAQQLYEGIDLGKQGTVGLITYMR
TDSTRISETAQTEARTYITEAYGTEYIGTEKKKETKKSNAQDAHEAIRPTSVMRKPEELK
SFLGRDQLRLYKLIWERFVASQMASAIMDTVTARLINNNVQFRASGSVVKFPGFMKVYVE
SKDDGAEEKDKMLPTLEVGETVFSKDLEPKQHFTQPPPRYTEARLVRTLEELGIGRPSTY
VPTLETIQKRGYVGLDNKRFVPTELGEIVIELILEFFPEIINIEFTANMEQSLDEVEEGN
ANWVKIVDDFYVGFEPRLEKAEKEMREVEIKDEPAGEDCELCNHPMVFKMGKYGKFMACS
NFPDCRNTKPIVKEIGVTCPKCDKGQIIERRSNKKKRLFYGCGTYPECDFVSWDKPIGRK
CPKCEGMLVEKKLKKGVQVQCISCDYEEEQQM
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattacctcgtaatcgtggagtcgccttctaaggcgaagaccattgagaaatat
ttagggaaaaaatacaaagttgtcgcgtctatgggacatgttcgcgatttgccaaaaagt
caaatggggatagaagtaaagaacaacttcaccccgaagtatattaccattcgtggtaaa
ggtcccgtcttaaaagatttaaaatcagcggccaaaaaagcaaagaaagtctatctcgcg
gccgatccagaccgtgaaggggaagcgattgcttggcatttagcgaatacgttaaatgtg
gacgttgaatcagattgtcgggttgtgtttaatgagattacgaaagatgcgatcaaagaa
tcatttaaacatcctcgtgcaattaatatggatttagtggatgcacaacaagcaagacgt
atacttgatcgtcttgttggttacaatattagtcctttattatggaagaaagtaaaaaaa
ggattaagtgcaggacgtgtacaatctgtagcagttcgtttaatcatcgagcgtgaaagg
gaaattcaaaactttgaacctgaagaattctggacaattaaaacagaatttgtaaaagga
aaagacacatttgaagcaagcttttacggtgtagatggtgaaaaagttcaattaacaaat
gaaacgcaagtgaatgaaataattgaacagatgaaagacaatgcgttttcagttgaaaat
gtaacgcgcaaagagcgaaaacgtaaccctgcattaccgtttacaacatcttccttgcaa
caagaagcagcccgtaagttaaacatgcgagcaaagaaaacaatgatgcttgcacagcaa
ttgtatgaagggatagatcttggaaaacaaggaactgtaggtcttattacgtatatgaga
actgattcaacacgtatctcagaaacagctcaaacagaggctcgtacttacatcactgaa
gcgtatggtacggaatacataggaacagaaaagaagaaagaaacgaaaaagtcaaatgca
caagatgcgcatgaggcaattcgtcctacttcggtaatgagaaagccagaggaactaaaa
agtttcttaggtcgtgatcaacttcgattatataaattgatttgggagcgatttgttgca
agtcaaatggcgtctgctataatggatactgtgacagcgagactcattaataacaatgtt
cagttccgtgcaagtggatcggttgtaaagttcccgggatttatgaaagtgtatgtagag
tcaaaagatgatggtgctgaagaaaaggataagatgttgccgactttagaagtaggggaa
actgtattttcaaaggatttagaaccaaagcaacattttacacaacctcctccgcgctat
acagaggctcgcctagtaagaacacttgaagaacttggaattggaagaccgtcgacatat
gtacctacacttgaaacgattcaaaagcgtgggtatgtaggcttggataataaacgcttc
gttccgactgaacttggtgaaatagtaattgaacttattttagagtttttcccagaaatt
attaacattgaatttactgccaatatggagcaaagccttgatgaagtagaagaaggaaat
gcgaattgggtaaaaattgttgatgatttctacgtaggttttgaaccgcgtttagaaaaa
gcggaaaaagaaatgcgtgaagtggaaattaaagatgaaccagctggggaagattgtgaa
ttatgtaatcacccaatggtctttaaaatgggtaaatacgggaaatttatggcttgctcg
aatttcccagattgtcgtaatacaaagccgattgtgaaagaaatcggtgttacttgtcca
aagtgtgataagggtcaaattattgaacgccgtagtaataaaaagaaacgtcttttctat
gggtgcggtacgtatccggaatgcgactttgtatcttgggataagccaattggtcgtaag
tgtccgaagtgcgaaggcatgcttgtagagaaaaagttgaaaaaaggcgtgcaagtacaa
tgtatttcgtgcgattatgaagaagaacaacaaatgtga
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