Bacillus thuringiensis serovar kurstaki YBT-1520: YBT1520_22960
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Entry
YBT1520_22960 CDS
T03435
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bthr
Bacillus thuringiensis serovar kurstaki YBT-1520
Pathway
bthr03030
DNA replication
bthr03430
Mismatch repair
bthr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bthr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YBT1520_22960 (holA)
03430 Mismatch repair
YBT1520_22960 (holA)
03440 Homologous recombination
YBT1520_22960 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bthr03032
]
YBT1520_22960 (holA)
03400 DNA repair and recombination proteins [BR:
bthr03400
]
YBT1520_22960 (holA)
Enzymes [BR:
bthr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YBT1520_22960 (holA)
DNA replication proteins [BR:
bthr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YBT1520_22960 (holA)
DNA repair and recombination proteins [BR:
bthr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YBT1520_22960 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
AHZ53177
LinkDB
All DBs
Position
complement(4403001..4404011)
Genome browser
AA seq
336 aa
AA seq
DB search
MSDIHKKIKKKQFAPLYLIYGTEAFFINETIKLITTEALEEEDREFNVVTYDLEEAYLED
VVEDARTLPFFGERKVLLIKSPLFLTSQKEKLEQNIKILEEYIGEPSPFSILVFVAPYEK
LDERKKITKLLKKTADVVEANAMQVQDVQKWIVARADEVHVHIDNAAVSLLLELVGSNVT
MLAKEMDKLTLYVGMGGEITTKLVAELVPKSVEQNVFALTEKVVKKDIAGAMQILDGLFT
QQEEPIKLLALLVSQFRLLYQVKELQQRGYGQNQIASHIGVHPYRVKLAMNQTKFFSFEE
LKKVIIELAEADYSMKTGKMDKKLVLEFFLMRLNHM
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatatacataaaaaaattaaaaagaaacagtttgctccgttatatttaatatat
ggaacggaagctttttttataaatgaaacgataaagcttattacgacagaagcacttgaa
gaagaagatcgagagtttaatgttgtgacatacgatttagaagaagcgtatttagaagat
gtggttgaggatgcgcgtacgcttcctttcttcggagaacggaaagtactgttaataaaa
tcaccgctatttttgacttcgcaaaaagaaaagttagagcaaaatataaaaattttagaa
gaatacattggtgaaccttctccattttctattcttgtttttgttgcgccttacgaaaaa
cttgatgagcgaaaaaaaattacaaaactattaaagaaaacagcagatgtagtagaagcg
aatgcgatgcaagtacaggatgttcagaagtggattgttgctcgtgcagatgaagtgcat
gtgcatattgataacgcggctgttagtttgttgctagagcttgtgggaagtaatgtaacg
atgttggcgaaggaaatggacaagttaacgttatacgttggtatgggcggagagattacg
acgaaacttgttgcagagcttgtgccaaaatcagttgagcaaaatgtatttgctttgaca
gaaaaagtggtgaaaaaagatattgcaggtgcaatgcaaattttggatggattatttacg
cagcaggaagagccgattaaattgcttgcgttattagtgagtcaattccgcttgttgtat
caagtgaaagagctacagcaacgtggttatggacaaaatcaaattgcgtctcatattggt
gtacatccgtatcgtgtaaagttagcaatgaatcaaacgaagtttttctcttttgaagaa
ttaaaaaaagtgattatagaattagcggaagctgattatagtatgaagacgggaaagatg
gataagaagcttgtgctcgaatttttcttaatgcgattaaatcatatgtga
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