Bacillus thuringiensis serovar kurstaki YBT-1520: YBT1520_28420
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Entry
YBT1520_28420 CDS
T03435
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bthr
Bacillus thuringiensis serovar kurstaki YBT-1520
Pathway
bthr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bthr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YBT1520_28420 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bthr03021
]
YBT1520_28420 (rho)
03019 Messenger RNA biogenesis [BR:
bthr03019
]
YBT1520_28420 (rho)
Transcription machinery [BR:
bthr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
YBT1520_28420 (rho)
Messenger RNA biogenesis [BR:
bthr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
YBT1520_28420 (rho)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
ATPase_2
AAA_25
AAA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHZ54250
LinkDB
All DBs
Position
complement(5422673..5423503)
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AA seq
276 aa
AA seq
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METEPKKLPTRIMDLIAPVGFGQRGLIVAPPKAGKTSLLKEIAHSVTTNHPEAELIVLLI
DERPEEVTDIERSVKGDVVSSTFDEVPENHIKVAELVLERAMRLVEHKKDVIILMDSITR
LARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGAARNIEEGGSLTILATALVDTGSRMDD
VIYEEFKGTGNMELHLDRSLAERRIFPAIDIRRSGTRKEDLLIPKEHLDKLWGIRKTMRD
TPDFVESFLRKLRQTKTNEEFLQNIVADSKRYVTTK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
ttggaaacggaacctaaaaagttaccgacacgcatcatggatttaatcgcaccagttgga
tttggacaacgtggtttaattgttgcgcctccaaaggctggtaaaacaagtctattaaaa
gaaatcgcgcatagtgttacaacaaatcatccggaagcagaattaattgtacttttaatt
gatgagcgtccagaggaagtaacagacattgaacgttctgttaaaggagatgttgtaagt
tctacttttgatgaagtgccagaaaatcatattaaagtagctgagcttgtgttagaacgt
gcgatgcgtcttgtagagcacaagaaagatgttatcattttaatggatagtattacccgt
ttagctcgagcttacaacctcgttattccaccaagtggtagaacattatcaggtggtatc
gatccagctgccttccatagaccgaagcgtttctttggagctgcgcgtaatattgaagaa
ggcggtagcttaacaattttagcgacagcccttgttgatacaggatcacgtatggacgat
gttatttacgaggaatttaaaggaactggaaatatggaacttcacttagatcgttcatta
gctgaacgtcgtatcttcccggcgatcgatattcgtcgttctggtacacgtaaagaagat
ctattaattccaaaagaacatttagacaagttatggggcattcgtaaaacaatgcgtgat
acaccagacttcgttgaaagtttcttacgtaagcttcgtcaaacgaagacaaatgaagag
tttttacaaaacattgttgcagactcaaaaaggtatgtaacaactaagtaa
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