Brochothrix thermosphacta: CNY62_07160
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Entry
CNY62_07160 CDS
T05089
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
bths
Brochothrix thermosphacta
Pathway
bths03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bths00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CNY62_07160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bths03400
]
CNY62_07160
DNA repair and recombination proteins [BR:
bths03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CNY62_07160
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CNY62_07160
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
AAA_21
AAA_22
nSTAND3
nSTAND1
DnaJ_CXXCXGXG
AAA_18
AAA_25
AAA_14
AAA_23
Viral_helicase1
ATPase_2
NACHT
AAA_17
NB-ARC
DUF3987
P-loop_TraG
Septin
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ATF27246
UniProt:
A0A291KJP4
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All DBs
Position
1489362..1492229
Genome browser
AA seq
955 aa
AA seq
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MRKNEISVQGARVNNLKNIDVVIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSHNPRSTVGTVTEINDYLRLLYARVGHP
ICPNHNIEIKAQTIEKMVERIMALPERSRIQILSPLVRGKKGEHKKLLQDIKKEGYVRVR
VDGELYDVSDEITLEKNKKHNIDIIIDRIVVKEGIETRLSDSLEAALRLADGYAVIDVAE
SEELLFSEHYACPYCGFNVGELEPRLFSFNAPYGSCETCDGLGRTLKADIELVIPDMQKT
LNEGAFVAWNPISSKYYPQMLASACHDFNIDMDTPFADLSADDQQLLLNGSGERLFHFHY
TNDFGNTKDVDIPFEGVMTNIERRYKETNSDFVRDTMMGYMAEQPCKACSGYRLNEKARS
VKIAGRHIGEICELAIVDSVKWVEALTLGAQDAQIAEPIVKEICNRLGFLDNVGLEYLTL
ARTAGTLSGGEAQRIRLATQIGSKLTGVLYILDEPSIGLHQRDNARLIDALKEMRDIGNT
LIVVEHDEDTMMAADYLIDVGPGAGEHGGEIVAAGTPEKVMKNRKSLTGQYLNGKKFITV
PTERRKGNGNFLKVTGATENNLKNIDFTVPLNTFTTVTGVSGSGKSTIVNEIVRKALSRH
VNRANVKPGKHKKITGMEHIEKIIDINQSPIGRTPRSNPATYTGVFDDIRDLFTATNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNSETLDIHYRG
KNISDILNMTIEEGVEFFQNVPRIERKLRTIVDVGLGYVRLGQPATTLSGGEAQRVKLAS
ELHKRSAGKSFYILDEPTTGLHADDIKRLLTVMQRLVDNGDTVLVIEHNLDVIKQADNII
DLGPEGGAGGGQVIAVGTPEEICKVPESYTGKYLKEVLERDKARVSATVKKAKAK
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
gtgagaaaaaatgaaatcagtgtgcaaggcgcacgcgttaataacttaaagaatatcgat
gtggtaattccgcgcgataaattagtagtgatcactgggctatcaggctctggtaaatca
tcgttagcatttgacacgctatacgctgagggacaacgtcgttatgttgaatcattgtcg
gcatacgcacgtcaatttttaggtcaaatggataaacctgatgtggatacaatcgaaggc
ttatcgcctgcgatttcaatcgatcaaaaaacgacgagccataatccgcgttcaacagtc
gggacagtaactgaaattaatgattatttacgtttgctttatgcacgtgtcggccatcct
atttgtccaaatcacaatatcgaaattaaagcgcaaacgattgagaaaatggttgaacgt
attatggctttgccagaacgctcacgtattcaaatattatcaccgcttgttcgtggaaaa
aaaggtgaacataaaaagctcttacaagatatcaaaaaagaaggttatgttcgtgtccgt
gttgatggggagctttatgatgtctcagatgagattacgttggaaaaaaataaaaaacat
aatattgatattattattgaccgtattgttgtaaaagaaggcatcgaaacacgtttgtca
gattcattggaagccgctttacgtttagcagatggttatgcagtcattgatgtcgctgag
agtgaggaactactctttagtgaacattatgcgtgtccttattgtggttttaacgttggg
gaacttgaacctagactgttttctttcaatgcaccatacggatcatgtgaaacatgtgat
gggttaggaagaacattaaaagcggatatcgagttagtgatacctgatatgcagaaaaca
cttaatgaaggtgcgtttgtcgcatggaatccaatcagttcaaaatattacccacaaatg
ttagcaagtgcgtgtcacgattttaatatcgatatggatacaccgtttgcggacttaagt
gcggatgatcaacagctgttattaaacggttctggtgagcgcttattccattttcattac
accaacgattttgggaataccaaagatgttgatattccgtttgaaggtgtgatgacaaat
attgagcgtcgttacaaagaaacaaattctgattttgtgcgtgatacaatgatgggttat
atggcagaacaaccgtgtaaagcgtgttctggttaccgtcttaatgaaaaagcgcgttca
gttaaaattgcaggacgccatattggtgaaatttgtgaattggcaattgttgattcggtt
aaatgggttgaagcacttactttaggtgcacaagacgctcaaatagcagaacccatcgtt
aaagaaatttgtaaccgtttaggttttcttgataacgtcggtttggagtacttaacttta
gcgcgtacagcaggaacattatcaggtggggaagcccaacgtattcgtttggcaactcaa
atcggttcaaaattgacaggtgttctttatatcttagatgagccttctatcgggttacat
cagcgtgataacgcgcgtttgattgatgcattgaaagaaatgcgtgacatcggaaacaca
ttaattgtcgttgaacatgatgaagatacgatgatggctgccgattatttaattgatgtt
ggccctggtgcgggtgaacatggtggtgaaattgttgctgctggaacgccagaaaaagtc
atgaagaaccgcaagtcattaaccgggcaatatttaaacggtaaaaagtttattacagtt
ccaacagaaagacgtaaaggtaacggtaacttcttaaaagtaaccggggcaacagaaaac
aatttgaagaatattgattttacagtcccattaaatacttttacaacagtaactggtgtc
tctggttctggtaaaagtaccattgtgaatgaaattgtgcgtaaagcattatcgcgacat
gtcaatcgtgcgaatgttaaacctggtaaacataaaaagatcacaggtatggaacacatt
gagaaaataattgatattaatcaatcgcctattggtcgaacaccacgttcgaacccagcg
acgtatacaggtgtatttgatgacattcgtgatttattcactgcgacaaatgaagcgaaa
gtacgtggctataaaaaaggtcgttttagttttaatgtgaaaggtggtcgctgtgaagct
tgtcgtggcgatggtattattaaaattgagatgcatttcttgccagatgtgtatgtccct
tgtgaagtttgtcacggtaaacgttacaacagtgagacgctcgatattcattatcgtggt
aaaaatattagtgatatattgaatatgacgattgaagaaggcgttgaatttttccaaaat
gtgccgcgcatcgaacgtaagttaagaacaatcgttgatgttggtttaggttatgttcgt
ctaggtcaaccagcgacaactttatcgggtggtgaagcacaacgtgttaaattagcctca
gagctacataaacgctcggctggtaaatcattctatatcttagatgaaccgacgacaggt
ttgcatgctgatgatatcaagcgtttattaacagtgatgcagcgcttagtcgataatggt
gatacagtgttggtgattgagcataatcttgatgtgattaaacaagccgataatatcatt
gatttgggaccagaaggtggagctggcggtggacaagtaatcgcagttgggacaccggaa
gaaatttgtaaagtccctgaatcatatacaggtaaatatttaaaagaagtactagaacgt
gataaggcacgcgtgagtgccacagtgaaaaaagctaaagcgaaataa
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