Brochothrix thermosphacta: CNY62_08770
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Entry
CNY62_08770 CDS
T05089
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bths
Brochothrix thermosphacta
Pathway
bths03030
DNA replication
bths03430
Mismatch repair
bths03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bths00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CNY62_08770
03430 Mismatch repair
CNY62_08770
03440 Homologous recombination
CNY62_08770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bths03032
]
CNY62_08770
03400 DNA repair and recombination proteins [BR:
bths03400
]
CNY62_08770
Enzymes [BR:
bths01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CNY62_08770
DNA replication proteins [BR:
bths03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CNY62_08770
DNA repair and recombination proteins [BR:
bths03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CNY62_08770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ATF26469
UniProt:
A0A1D2LZ02
LinkDB
All DBs
Position
1812623..1815919
Genome browser
AA seq
1098 aa
AA seq
DB search
MTTYTHLQVATAFDLLSSTLKIDELVTEAKKAGFQSLAMTNHNQLYGAMRFQQACKENGI
KAIYGMTIDVESTLGESDSYPVIVLAKNTEGYHELMKLTSALQTEERAFLPKNWFDAYSK
NIVIILPVENGEITNLLPEQRSMLLESYPDAYLGVSQPDSSITAWAFNETERTVVISDVR
YLYPADVKSMSVLKAIRDNEIIDWETLPTEGEQYLISPIELEKRWFTEPMRAALKRTNEI
AASTDVNIELHQKLLPKYVTPDGKTAANYLHELAYKGLAERFENPSAIYQERLSYELKII
SEMGFDDYFLIVWDLMFYAQSKGILTGPGRGSAAGSLVSYVLKITDVDPIAYRLLFERFL
NPERVSMPDIDLDFPDNRRDELITYTVEKYGVQHVAQIGTFGTLAAKAAIRDTARVFGLN
RVELSEWSNLLPAQVGLTLKGAEAESKALVRHIKMSKRNEEIWRIATTIEGLPRHMSTHA
AGVIISDAPLIDYVPLQQGSGDALLTQYPMGDIEAIGLLKMDYLGLRNLTMLATIIKAVR
FENPAFDIEKISLNDADTLKLFQAGDTNGVFQFESPGIRRVLQRLIPTSFEDVVAVNALY
RPGPMEQISTFIARKHGKEKVTYTHPALEAILEPTYGVIVYQEQIMQIASALAGFSLGEA
DMLRRAVSKKKAEVLQEQREHFIAGAQKQQVDEKIAEDVYDLIVRFANYGFNRSHSVAYA
KIAFQLAYLKAHYPAAFYSALMTSVSGDDNKIETYIAESRQRDIKLLPPSVNASFSFFSN
ENGSIRYALSSIKKVGAQTVRVIVEERKTAGKYTDFFDFCRRLPAKVTTQPILEALILAG
ACDEWGKTRTTLLASIEAALNLAELSRKGDSPVDLFGDLGGGKLALKPKYTEMEEMPAVD
RLTQEKEYLGTYLSEHPLTSYPHQLKQALTQTIMQVPQDKAANFGVYIHRLKETRTKNGE
LMCFLTVSDASMEISAVAFPNAYRNMKGKIAENQAVILNGKVSTRQNKKQLIVNDMTVLD
ENDQQYAPKPKLYLNSEADQIDEIKLLLESSPGSTEVIVVQKSTRQALKLNDNYHVTLTD
RLADGLTALLTERGWVLK
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgacgacatatacacatttacaagtggcgacagcttttgatttgctatcgagcacttta
aaaatagacgagttggtgacagaagctaaaaaagcagggtttcagtcattggcaatgaca
aaccataatcaactgtatggtgcgatgcgcttccaacaagcttgtaaagaaaacggaata
aaagcaatctatgggatgacgattgatgtagaaagtacactaggagagtcggacagttac
cctgtcattgtactagcaaaaaatacagagggttatcatgaactgatgaagttgacgagt
gctttacaaacggaagaacgagcatttttacctaaaaattggtttgatgcgtattcaaaa
aatattgtgattattttgcctgtcgaaaatggggaaataacaaatctgttgccagaacag
cgcagtatgttgcttgaaagttatccagatgcttatttgggagtgagccaacctgattcc
agtataactgcttgggcttttaatgaaacggagcgcaccgtggtaatcagtgacgtacgt
tatctttatccagcagatgttaagagtatgtctgtgctaaaggccatccgtgacaatgag
attattgattgggaaacattaccaacagaaggtgaacagtatctaatcagcccaatcgag
ctagaaaaacgctggtttaccgaaccaatgcgtgctgcattaaagcgaacaaatgaaata
gctgcatcaacagatgtaaacattgagttgcatcaaaagctgttacctaaatatgttacg
cccgacggaaaaacggcagctaattatctgcatgaactggcgtataaaggtttggcagaa
agatttgaaaacccgagtgcaatttatcaagagcgtctttcttatgaattgaagattatc
tctgaaatgggttttgatgattattttttaattgtttgggatttgatgttttatgcccaa
agcaaaggtatcttaacagggccagggcgtggatcagcagcaggttcattagtatcctac
gtgttgaaaattacagatgttgatccgattgcctatcgtttgttattcgaacgtttttta
aacccggaacgcgtttccatgcctgatattgatttggattttcctgataaccgtcgtgat
gaactcatcacttatacagtcgaaaaatacggtgtgcagcatgttgcgcaaattggtaca
tttggaacgttggcggctaaagctgctattcgtgatacggcacgtgtatttggattgaat
cgtgtagaattaagtgagtggtctaatctcttgcctgcacaggtggggctaactttaaaa
ggtgctgaagcggaatcgaaagcacttgtacgtcatataaagatgtctaaacgtaatgaa
gaaatatggcgaatagcgacaacaatcgaaggattaccaagacatatgtcaacacatgcc
gcaggtgtgataattagcgatgctcctttgattgattatgtgcctctacaacaagggagt
ggtgatgcattgcttacacaatatccaatgggggatattgaagcgattggtttattgaaa
atggattatttaggcttaagaaatttgacgatgttggcaacaattattaaagccgttcgt
tttgaaaatccggcatttgatattgagaaaatttctttgaatgatgcagacactttaaaa
ctctttcaagcaggcgatacaaacggtgtttttcaatttgaatcaccaggtattcgacgg
gtacttcaacgtctaattccaacttcttttgaagatgttgtagcggttaatgcgttatat
cgtccaggtccaatggagcaaatcagtacatttattgctcgtaaacatgggaaagaaaag
gtaacctatacgcacccagctttagaagcgattttagaaccaacttatggcgtcattgtt
tatcaagaacagatcatgcaaattgcttcagcacttgctggttttagtttgggagaagcc
gatatgttacgtcgggcagtaagtaagaaaaaagctgaggtactacaagagcaacgtgaa
cattttatagctggtgcgcaaaaacaacaagtggatgaaaaaatagcagaggatgtttat
gatttaatcgtccgttttgccaattatggttttaaccgttctcactctgttgcttatgca
aaaattgctttccaacttgcctacctcaaggcacattatcctgctgctttttattcagcg
ttaatgacatctgtttcaggtgatgataataaaattgagacttatattgctgaaagtcgt
caacgtgatataaaactgttgccgccatctgtcaatgcgagttttagtttcttcagtaat
gaaaatggcagcattcgatacgcactatccagcataaaaaaagttggggcacaaacagtt
agagttattgtcgaagagcgtaaaacagcgggtaaatatacagatttctttgatttttgt
cgccgcctaccggcgaaagtaacaacacaaccaattttagaagctttaatattagcaggt
gcatgtgatgaatggggcaaaaccagaacgacattattggcctcaattgaagcggcttta
aatctagcagaattaagtcgtaagggtgattccccagttgatttattcggtgatttgggc
ggtggtaaattggccttgaaaccaaaatatactgagatggaagaaatgccagcagttgat
cgtttaacacaagaaaaagagtatttaggcacctatctttcagagcatccattaacaagt
tatccacatcaacttaaacaggctttgacccagactattatgcaagttcctcaagataaa
gcggctaattttggagtgtacattcatcgcttaaaagaaacgcgtactaagaacggggaa
ttgatgtgttttttaactgtaagtgatgcgagtatggagatttcagccgtagcttttccg
aacgcttatcgtaatatgaaagggaaaattgctgaaaatcaagcggtgattttaaatggt
aaagtaagtactcgtcaaaataaaaaacaattaattgtcaatgatatgacagtgttagat
gaaaatgatcagcaatacgcaccaaaacctaaactctatttaaatagtgaagccgatcaa
attgatgaaattaaactgttattagagagttctccgggaagtacagaagtgattgttgtt
caaaagagtactcgtcaagcgttaaaattgaatgataattatcatgtaacacttaccgac
cgtttagcagatggattgacggcgttgttgacagagcgtggctgggtgttaaaatag
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