Brochothrix thermosphacta: CNY62_09340
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Entry
CNY62_09340 CDS
T05089
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bths
Brochothrix thermosphacta
Pathway
bths03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bths00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNY62_09340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bths03019
]
CNY62_09340
03009 Ribosome biogenesis [BR:
bths03009
]
CNY62_09340
Enzymes [BR:
bths01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CNY62_09340
Messenger RNA biogenesis [BR:
bths03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CNY62_09340
Ribosome biogenesis [BR:
bths03009
]
Prokaryotic type
rRNA helicases
CNY62_09340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
PEX14-like_2nd
Motif
Other DBs
NCBI-ProteinID:
ATF27264
UniProt:
A0A291C1D3
LinkDB
All DBs
Position
1944727..1946223
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AA seq
498 aa
AA seq
DB search
MGFEEATPIQSKTIPLAIAGKDLIGQAQTGTGKTAAFGLPLIQKIDPKNDNVQAIIIAPT
RELAIQVAEELYKLSFDKRARVLSVYGGSDIGRQIRSLKKNPQIVVGTPGRVLDHIRRKT
LKLNNVETVVMDEADEMLNMGFIDDIETILSEIPKERQTLLFSATMPDPIRRIAERYMQS
PEVVRVAAKEMTALLIEQFYVKVQEKEKFEALVRLLDVQAPKLSIIFGRTKRRVDEVSRA
LDMRGFNAEGIHGDLTQAKRLSVLRKFKEGKIDILVATDVAARGLDISNVSHVYNFDIPQ
DPESYVHRIGRTGRAGKEGMAVTFVSPRELGYLRIVEQTTKKRMTPLEPPTEDQAFSSQL
TQSVEQVMDKVRKGNLESYVTSARDLLESVSAEDAVAAMLALVTKTPDQTPVHITEERPL
PNRGGGGNRGSKGGGGYKGKRTSSSGKGGGGYKGNGGSRRSSGGGASSDRKEGGARRERP
AGNGGSRRSSGERSSFKK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgaggaagctacaccaatccaatcaaaaacaatcccattagcaattgcagga
aaagatttaattggacaagcacaaacaggtacaggtaaaactgctgcttttggtttgcca
cttattcaaaaaatcgatcctaaaaatgataacgttcaagctatcattattgcaccaaca
cgtgagttagcaattcaggttgctgaagagctttacaaattaagctttgacaaacgtgca
cgtgtattatcagtttacggtggtagtgacattggtcgccaaatccgttcgttgaaaaaa
aatccacaaatcgttgtcggaactccaggtcgtgttttagaccatattcgtcgtaaaaca
ttgaaattaaacaatgttgaaactgtcgtaatggatgaagctgatgaaatgttgaacatg
ggattcatcgatgatatcgaaacaatccttagcgaaattcctaaagaacgtcaaacattg
ttattctcagcaacaatgcctgatccgattcgtcgtatcgctgaacgttacatgcaatca
ccagaagttgtacgtgttgcagctaaagaaatgacagcacttttaattgaacaattttac
gttaaagttcaagaaaaagaaaaatttgaagcgttggtacgtcttttagatgtacaagca
ccaaaattatctatcatcttcggccgtacaaaacgtcgtgttgatgaagtttcacgtgca
ttagatatgcgtggattcaacgctgaaggtattcatggtgatttaacgcaagctaaacgt
ttaagtgtattgcgtaaatttaaagaaggtaaaattgatatcttagttgcaactgatgtt
gctgctcgtggattagatatttctaacgtatctcacgtttataactttgatattccgcaa
gatccagaatcatacgtacaccgtattggtcgtactggtcgtgcaggtaaagaaggaatg
gctgttacatttgtatcgccacgtgaattaggttacttacgtattgttgaacaaacaact
aagaaacgtatgactcctcttgagccaccaacagaagatcaagcattttctagccaattg
actcagtcagttgagcaagtaatggataaagtacgtaaaggtaacttagaaagctatgtt
acatctgctcgtgacttgcttgaaagtgtttctgctgaagatgcagttgctgcaatgctt
gcattagtaactaaaactccagatcaaacaccagtacatattactgaagagcgtccattg
cctaaccgtggcggtggaggaaaccgtggcagcaaaggcggcggcggatacaaaggtaaa
cgtactagcagcagcggcaaaggcggcggcggttacaaaggtaacggcggttcacgtcgt
agctcaggtggcggcgcttcaagtgatcgtaaagaaggcggcgctcgtcgtgaacgtcca
gctggaaacggcggttcacgtcgtagctcaggcgaacgtagttcatttaaaaaataa
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