Brochothrix thermosphacta: CNY62_12125
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Entry
CNY62_12125 CDS
T05089
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bths
Brochothrix thermosphacta
Brite
KEGG Orthology (KO) [BR:
bths00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bths03032
]
CNY62_12125
03400 DNA repair and recombination proteins [BR:
bths03400
]
CNY62_12125
Enzymes [BR:
bths01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CNY62_12125
DNA replication proteins [BR:
bths03032
]
Prokaryotic type
DNA Topoisomerases
CNY62_12125
DNA repair and recombination proteins [BR:
bths03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CNY62_12125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Toprim_4
RNA_POL_M_15KD
Toprim_3
DUF2996
Toprim_2
Lar_restr_allev
Cys_rich_KTR
HypA
Motif
Other DBs
NCBI-ProteinID:
ATF27048
UniProt:
A0A1D2KVS2
LinkDB
All DBs
Position
2487433..2489511
Genome browser
AA seq
692 aa
AA seq
DB search
MADYLVIVESPAKAKTIEKYLGKKYKVKASMGHLRDLPKSQMGVDTENNYEPRYITIRGK
GSILKELKQAAKKVKKVYLAADPDREGEAIAWHLANSLNLDLEDDLRVVFNEITRDAVKE
SFKHPRKLDMDLVNAQQARRVLDRLVGYNISPVLWKKVKKGLSAGRVQSIALKLIIDREH
EVNKFVPEEYWTIDGQFIKGKKQFQANFYGLNGKKKELKDSDDVKEIVDQIKSKDFVVDK
VTKKERKRNPAAPFTTSSLQQEAARKLNFKTRKTMMIAQQLYEGIAIGRSGTVGLITYMR
TDSTRISDTAIEAAKTFIGETYGEEYLRTEARKDKKQKGAQEAHEAVRPSRLDKSPTEIK
KYLSRDQFRLYKLIWERFIASQMAPAVLDTMRVDLSNNNVNFRANGSKIKFNGFMKVYVE
GSDDGTDEKENILPDMKEGETVKSVTVDPRQHFTQPPPRYTEARLVKTLEEIGIGRPSTY
APTLDTIQRRNYVTLDNKRFMPTELGEIVYGLIAEYFPEIIDVTFTATMEDKLDAVEHGK
MEWIRVIDEFYQPFEKEIQKAEAEMEKIVIEDEPAGIDCELCGKPMVIKMGRYGKFMACS
GFPDCRNTKAIVKEIGVMCPKCKEGQVIERKSKKNRIFYGCDRYPACEYVSWDRPIERPC
PKCNEHTLVVKKLKKGNQITCTSCDYKEQEQQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggctgattatctagtcattgttgagtcaccagcgaaagctaaaacaattgaaaagtat
cttggaaaaaagtataaagtaaaagcctcaatgggacacttacgtgaccttcctaaaagt
caaatgggcgttgatactgaaaataattatgaaccacgttatattacaattagaggaaaa
ggtagtatcctaaaagaattgaaacaagcagcaaaaaaagtgaaaaaagtttatctcgca
gccgatccagatcgagagggagaagcaattgcatggcatttagctaacagtttaaacctt
gatttagaagacgatctccgtgtggtatttaatgaaatcacacgggatgctgttaaagaa
tcgtttaaacaccctcgaaagttagacatggatttggttaatgcacaacaagcacgccgt
gtccttgaccgtttagtagggtacaatatcagccctgttttatggaaaaaagtaaaaaaa
ggtttgagtgctggtcgtgtacaatcgattgcattaaaattaatcattgatcgtgaacat
gaagttaataagtttgtacctgaagagtattggacaattgatggtcaattcattaaaggt
aaaaaacaattccaagccaatttttatggattaaatggcaagaaaaaagaattgaaagat
agcgatgatgttaaagaaatcgttgatcaaattaagagcaaggattttgtggttgataaa
gtaaccaaaaaagaacgtaaacggaatcctgccgcgccttttacaacgtcttcactgcaa
caagaagctgcgcgtaaacttaattttaaaacacgtaaaacaatgatgattgcacagcaa
ttatatgaaggaatcgcgattggacgttcgggtacagtaggtttaattacttatatgcgt
accgattcaacgcgtatatctgatacggctattgaagcagcaaaaacatttattggtgaa
acttatggtgaagagtaccttcgtactgaagctcgtaaagataagaaacaaaaaggggct
caagaagcccatgaagctgtacgtccttcccgtttagataaatcaccaacagaaatcaaa
aaatacttatcgcgcgatcaattccgtctatataaattaatttgggaacgttttattgcc
agtcaaatggcacctgcagttttagatacaatgagagttgatttatctaataataatgtt
aatttccgtgcgaatggttctaaaattaaatttaatggtttcatgaaagtttacgttgaa
ggctccgatgatggtacggatgaaaaagaaaacattttacctgatatgaaagaaggcgaa
actgttaaatcagtaaccgttgatccccgtcagcattttacgcagccacctccacgctat
acagaggcccgtttagtaaaaacgctcgaggaaattggaatcggtcgtccttcaacttat
gcaccaacgcttgatacgattcaacgacgaaattacgtcacgttagataacaaacgtttt
atgccaactgaattaggtgaaatcgtttatggtctgattgctgagtatttccctgaaatt
atcgacgttacgtttacagccacaatggaagataaattagatgctgtcgaacatggtaaa
atggaatggatccgagtgattgatgagttttatcaaccgtttgaaaaagaaatccaaaaa
gcagaagctgaaatggaaaaaattgtcattgaagatgaacctgctggcatcgattgcgag
ttatgtggcaaaccgatggtaattaaaatgggccgttatggtaagtttatggcctgcagt
ggtttccctgattgccgtaacacaaaggcgattgtaaaagaaatcggtgtaatgtgtcct
aaatgtaaagaaggtcaggttattgaacgtaagagtaaaaagaaccgtattttctacggt
tgtgatcgttatcctgcttgtgagtatgtgagctgggatcgtccaatcgaacgaccttgt
ccaaaatgtaacgagcatacgctggttgttaaaaagcttaaaaaaggaaatcaaatcaca
tgtacatcttgtgattataaagaacaagaacaacaatag
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