Bacillus thuringiensis serovar thuringiensis IS5056: H175_ch1088
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Entry
H175_ch1088 CDS
T02474
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
btht
Bacillus thuringiensis serovar thuringiensis IS5056
Brite
KEGG Orthology (KO) [BR:
btht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btht03400
]
H175_ch1088
Enzymes [BR:
btht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H175_ch1088
DNA repair and recombination proteins [BR:
btht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
H175_ch1088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_22
AAA_16
SLFN-g3_helicase
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGF99800
LinkDB
All DBs
Position
1152833..1156348
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AA seq
1171 aa
AA seq
DB search
MSLRFVIGRAGSGKSTLCLREVQEELKQRPRGKTILYLVPEQMTFQTQQALIGSEDVRGS
IRAQVFSFSRLAWKVLQEVGGASRLHIDEAGVHMLLRKIVESRKDGLSVFQKAAEQNGFF
EHLGSMIAEFKRYNVTPSNVYEMWQQLDAHSSSAEQKLLANKVYDLQLLYDDFERALIGK
YLDSEDYLQLLVEKLPQSEYVNGAEIYIDGFHSFSPQELEIVRQLMICGAKVTIPLTIDE
KTLAQPVNELDLFYETTLTYEKIKQVAREEKIEIEKTIPLMEQPRFHSPALAHLEAHYEA
RPNEKFNGEASVTISTAANLRAEVEGVAREIRKLVADEKYRYRDIAVLLRNGESYYDVMR
TLFTDYNIPHFIDEKRPMSHHPLVECIRSALEIISGNWRYDAVFRCVKTELLYPLDVRKE
VMREEMDEFENYCLAYGVQGKRWTAEDPWMYRRYRSLDDTNGMITDSEREMEEKINRLRD
VVRTPVIRMQKRLKRAGTVMQMCEAVYLFLEELDVPKKLEELRIRAEESGDFLFATDHEQ
VWEEVMSLLDTFVEMLGEEKMSLSMFTDVMSTGLEALQFANIPPSLDQVLIANIDHSRLS
DVKATFIIGVNEGVIPAAPMDEGMLSDEEREVLGAAGIELAPTTRQTLLEEQFVMYQMVT
RASEKLYISCPLADEEGKTLLASSFIKKIKRMFPNVKDSFITNDVNDLSRSEQISYVATP
EVTLSYVMQQLQTWKRYGFEGNLDFWWDVYNFYVTSDEWKQKSSRVLSSLFYRNRAKKLS
TAVSRDLYGDIIKGSVSRMELFNRCAYAHFAQHGLSLRERDIFKLDAPDIGELFHAALKK
IADKLLRENRTWADLSIKECEHLSVLVIEEIAPLLQRQILLSSNRHFYLKQKLQQIIFRT
SIILREHAKSSGFVPVDLEVPFGMGGTGSLPPMEFSLPNGVKMEVVGRIDRVDKAEDENG
TFLRIIDYKSSSKALDLTEVYYGLALQMLTYLDVVTSNAQTWMKKGHAASPAGVLYFHIH
NPIVEMKGDASEAEIEKEILKKFKMKGLVLGDADVVRLMDNKLSTGSSDIISAGLKKDGS
FSARSSIASEQEFNVLQKYVHHTFENIGKDITEGVIDIAPYKMGNKAACTFCNFKSVCQF
DESLEDNQFRSLKDMKDSEAMEKIREEVGGE
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttcgatttgtgattggtagagcgggaagtggaaaaagtacactttgtttacgt
gaagtgcaagaagagttaaaacagcgcccgagagggaaaacaatattatatcttgtgcca
gaacagatgacattccagacgcagcaggcgttaattggaagtgaggatgtaagaggttct
attcgggcacaagtttttagtttttcacgattagcgtggaaggtgctgcaagaagttggc
ggagcgagtcgtcttcatattgatgaagctggtgtacatatgttactccgtaaaattgta
gagtctcgtaaagatggattatcggtgttccaaaaagcagcggagcaaaatggtttcttt
gaacatcttggcagtatgatcgcggagtttaaacgttacaatgtaacgccatctaacgta
tatgaaatgtggcaacaattagatgcgcatagtagcagtgccgaacaaaagttactagcg
aataaagtgtatgatttacagttactatacgatgattttgaacgtgctttaattggaaaa
tacttagattcagaagactacctgcaattgctagtggaaaagcttccgcagtctgaatat
gtaaatggtgcggaaatttatatagacgggtttcattcattttccccgcaagagttagag
attgtaagacagcttatgatttgcggagcgaaagttacgatcccgttaacgatagatgaa
aaaacgttagcacagccagtaaatgaactcgatttattttatgaaacgacgttaacgtat
gaaaaaataaaacaagtagcgcgtgaagagaaaatagaaattgaaaaaacaattccactt
atggaacagccgcgttttcattctccagcattagcgcatttagaagctcattatgaagcg
cgtccgaatgaaaaatttaacggtgaagcgagtgtaacgattagtacagctgcgaattta
cgagcggaggtagaaggtgttgctcgtgaaattcgtaaacttgttgcggatgaaaaatat
cgttaccgagatattgcagtgcttcttcgtaatggggaaagttattacgatgtgatgcga
acgttatttacagattacaatatcccgcacttcatcgatgaaaagcgcccgatgtcacac
cacccattggtagaatgtattcgttctgcactcgagattattagtgggaattggcgttat
gatgcggtgttccgttgcgtgaaaacagagcttttatatccattagacgtaagaaaagaa
gtgatgcgtgaagaaatggatgaatttgaaaattactgtttagcgtacggtgtacaagga
aagagatggactgctgaagatccatggatgtatcgccgttatcgttctcttgatgatacg
aacgggatgattacagacagtgaacgtgaaatggaagagaaaataaataggctacgtgac
gttgtaagaacacctgttattcgcatgcaaaaaaggttaaagcgtgcaggaacagttatg
caaatgtgtgaagcagtttacttgtttttagaagaactggatgttccgaagaaactagaa
gaattacgtatacgtgcagaagaaagtggagatttcttatttgcgacagatcatgaacaa
gtatgggaagaagtaatgagccttcttgatacatttgtagagatgcttggggaagagaaa
atgtctctttctatgtttactgacgttatgtcgacaggtcttgaggcacttcaatttgct
aacattccgccgtcattagaccaagtgttaattgctaatattgatcactccaggttatct
gacgtgaaagcaacgtttattataggtgtaaatgagggtgtcattccagcagcacctatg
gatgaaggtatgctttctgatgaggaaagagaagttcttggtgcggcagggattgaatta
gcgccaacgacgagacaaactttgttagaagaacagttcgttatgtatcaaatggtaacg
agagcatctgagaagttatacatttcatgcccgcttgcagatgaagaaggaaagacgtta
cttgcgtctagctttattaagaaaataaaaagaatgttccctaatgtgaaagattcattt
attacgaatgatgtaaatgatttatcacgttcagaacaaatttcatatgtagcaacgcca
gaagtaacgttatcttacgttatgcagcaactacaaacgtggaagcgatacggatttgaa
ggaaatttagacttttggtgggacgtatataatttctacgtaacttcagatgaatggaaa
caaaaaagtagccgcgtcttatcaagtttattctatcgaaatcgtgcgaagaaactaagt
acagcagtaagtagagatttatacggagatataattaaaggaagcgtctctcgtatggaa
ctatttaatcgttgtgcatacgctcattttgcgcagcacggtttatcgcttagagagcgt
gatatttttaagcttgatgcgccagacatcggcgaattattccatgcggcattaaagaaa
attgcggacaagttattgcgtgaaaaccgtacttgggcggatttatctataaaagagtgt
gagcatctttctgttttagtaatagaagaaattgcgccgttattacaacgacaaatttta
ttaagctcaaaccgtcatttctatttaaaacaaaaactacaacaaatcattttccgtacg
tcaatcattcttcgtgaacatgcgaagtcaagcggattcgtaccagttgatttagaagtg
ccgttcggtatgggtggtacaggatcacttccgccgatggaattctcattaccaaatggt
gtgaagatggaagtggtcggccgtattgaccgtgttgataaggcagaagatgaaaacggg
acgttcttacgtattattgattataaatcaagttcaaaagcgttagatttaacggaagtg
tattacggattagcacttcaaatgttaacgtatttagatgtcgttacttcgaatgcacag
acgtggatgaaaaaaggccacgcagcatcaccagctggtgtattgtatttccatattcat
aacccaatcgttgagatgaaaggtgacgcatctgaagctgaaattgaaaaagaaatttta
aagaaatttaaaatgaaaggactcgtattaggagatgctgacgttgttcgtttaatggat
aacaaactttcaacaggaagctcagatattatttctgctggcctgaaaaaagacggtagc
tttagtgcgcgttcaagtattgcaagtgagcaagagtttaacgtactgcaaaaatatgta
caccatacgtttgaaaatatcggaaaagatattacagaaggtgttatcgatattgctcct
tataaaatgggaaataaagcagcatgtacgttctgtaacttcaaatctgtttgtcaattt
gatgagtcacttgaagataatcagttccgatcgttaaaagatatgaaagatagcgaagcg
atggagaaaataagagaggaggttggcggagaatga
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