Bacillus thuringiensis serovar thuringiensis IS5056: H175_ch1429
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Entry
H175_ch1429 CDS
T02474
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
btht
Bacillus thuringiensis serovar thuringiensis IS5056
Pathway
btht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H175_ch1429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btht03019
]
H175_ch1429
03400 DNA repair and recombination proteins [BR:
btht03400
]
H175_ch1429
Enzymes [BR:
btht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H175_ch1429
Messenger RNA biogenesis [BR:
btht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H175_ch1429
DNA repair and recombination proteins [BR:
btht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H175_ch1429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
HEM4
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
AGG00142
LinkDB
All DBs
Position
1466846..1468375
Genome browser
AA seq
509 aa
AA seq
DB search
MKLEEYLYKWFGYSEFRPGQKGVITDLLEGKDVIAMLPTGRGKSMCYQFPGLMREGTVLV
VSPLLSLMEDQVTQLKYVVKNRVIAFNSFRTLNEKREAMKKLSSYKFIFVSPEMLQSELL
IRELKKIHISLFVVDEAHCISQWGYDFRPDYKKLNVVIENIGSPTVLALTATATKEVLQD
IADSLNLKGAAEHVYSIDRPNIAMKVQFVETIEEKKEALLEQVMYLQGPGIVYCSSRAWT
ERLTEYLRGKGVTGVAFYHGGMEHEERMLIQQQFMNDQLQLVICTSAFGMGVNKANTQYI
IHFHYPTNIASYLQEIGRAGRDGEPSIAILLCSPLDHDLPISIIEDELPSKSQIQFLFSL
LQERMFQTKELPIEDVEEICYNAARFNEQYWRFVRYHLEQAGIIQQRRLLLEGLSDEIMN
RLIAEVEIRLRNKYSELENMKSWIRVKGCRREYVLQQFGYRKEKELNNCCDYCGITKEDY
KKRRAQQSDFDYNWETELQKLFGLEKMGE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgaagaatatttatataagtggtttggatattctgaatttcgtccaggtcaa
aaaggagttattacagatttattagaaggaaaagatgtgatagcaatgcttccgactgga
agagggaaatctatgtgctatcagtttccggggcttatgcgagaaggaacagtgcttgtt
gtatcaccgttattatctttaatggaagatcaagtgacacaattaaagtatgttgtgaaa
aaccgagtgatagcatttaatagttttcggacattaaatgaaaaaagagaagcgatgaaa
aaattatcttcatataaatttatttttgtttcaccagagatgttacagtcggagttatta
attagggaattgaagaaaattcatatttcattatttgttgttgatgaggctcattgtatt
tctcaatggggttatgattttagaccggactataagaaactaaatgtagttattgaaaat
attggttctcctacagtattagcattgacagctacagcgacaaaagaggtactacaagat
atcgcagacagtttaaatttaaagggtgccgcggaacatgtatactctattgaccgtcct
aatattgcaatgaaggtgcaatttgtagagacgatagaagaaaagaaagaggcgcttttg
gagcaggtgatgtatttacaagggccgggaattgtatattgttcaagtagagcgtggaca
gaaaggttaacggaatacttgagaggaaaaggtgttactggtgtagctttttatcatggt
ggtatggaacatgaagagcgtatgttaattcaacaacagtttatgaacgatcaattgcag
cttgtaatatgtacaagtgcatttggtatgggggtaaataaggcgaatacgcaatatatt
attcattttcattatccaactaatatagcttcttacttacaagaaatcggaagagctgga
agagatggcgaaccgagtatagctattttattgtgtagtccgttggatcatgatttacca
atttcaatcattgaggatgaattgccaagtaagtcgcaaatacaatttttattttcttta
ctacaagaaagaatgtttcaaacgaaagaattaccaatagaagatgtagaagaaatttgt
tataatgcagcaagatttaatgagcaatattggcgtttcgttcgttatcatctcgaacag
gctggaattatacaacaacgaagattattattagagggtttgtcagatgaaattatgaac
cgattaatagctgaagtagaaataaggttgcgtaataaatatagtgagctagaaaatatg
aagtcatggatacgagttaaaggatgtagacgtgaatatgtgctgcaacagttcggttat
aggaaagagaaagagttaaataattgctgtgattattgtggtattacaaaagaagattat
aaaaaaagacgagcgcaacaatcggatttcgactataattgggaaacagagttacaaaag
cttttcggcctagaaaagatgggggaatga
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