Bacillus thuringiensis serovar thuringiensis IS5056: H175_ch2295
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Entry
H175_ch2295 CDS
T02474
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
btht
Bacillus thuringiensis serovar thuringiensis IS5056
Brite
KEGG Orthology (KO) [BR:
btht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btht03400
]
H175_ch2295
DNA repair and recombination proteins [BR:
btht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H175_ch2295
Archaeal homologous recombinant proteins
H175_ch2295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
GTP_EFTU
ABC_tran
AAA_21
DUF6468
Motif
Other DBs
NCBI-ProteinID:
AGG01008
UniProt:
M1PK02
LinkDB
All DBs
Position
2280815..2283904
Genome browser
AA seq
1029 aa
AA seq
DB search
MRPIQLIMTAFGPYKQKEVIDFEDLGEHRIFAISGNTGAGKTTIFDAICYVLYGEASGEE
RSDTSMLRSQFADDDVYTSVELTFQLKGKRYEIKRQLGHKKQGNKTITGHAVELYEVIDG
ENVPAVDRFHVTDVNKKVEDLIGLSKHQFSQIVMLPQGEFRKLLTSETENKEEILRRIFK
TDRYKLMRELLDQKRKQWKDVLQEKQKERELYFRNVFKLPIRDGALLETLAAQEHVNTHQ
VVEALEQETTVYKAEVEQLQVEQDVQTKQLKDAETRFHAAKSVNEKFIDLQQKNEKYNTL
QENRAAIERKEKSFKRAEQAKRLLPFEQWYEEAMQNEQKAESLLKQIIVKQEQIMNSFEL
AQEKYEVVKNKEAEREEAKKLVQRLEELQAIIESLAERKLNLQNAEIQIGKLKESMQKLD
QQLEEHTSQKQRMSDELQQLEQALEQYVAKVEELTNMREDAKVLKQAYDVWQEKQKFEQE
KEVANNKMHVVVRAYENMERRWLSEQAGILALHLHDGASCPVCGSTNHPQKATEQSNAID
EKELNDLRDKKNIAEKLHVQVEEKWNFYRLQYEQVIEEVVKRGYNSEKLVETYSVLVQKG
KQLAADVNTLKASEETRKQIAANMKSVEERIEELQKQKREVEIMQHRTEMECMQLRTSYE
HDKRNIPENLQTVQAWKAQFDQAMHELRLMEDEWKKVQEAYQHWQNENIRIQAEQKGASN
QFESAKLKKEETFARFMKELEQSGFTDQFTYKEAKLSDAEMEMLQKEIQGYYSSLEVLAK
QIEELNSELKDKEYMDITSLGEHIKELEINLDIIKEKRQRAQNAVTYISDLHENIRSIDE
QIHEEEKAFQELVDLYEVMKGDNESRISFERYILIEYLEQIVQIANERLRKLSNGQFYLK
RSERVEKRNRQSGLGLDVYDAYTGQTRDVKTLSGGEKFNASLCLALGMADVIQAYEGGIS
IETMFIDEGFGSLDEESLTKAVDALIDLQKSGRFIGVISHVQELKNAMPAVLEVTKQKDG
CSQTRFVVK
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgattcagcttattatgacagcattcgggccatataaacagaaagaagtaatc
gattttgaagatcttggagaacatcgtattttcgctatttctgggaatacgggagctgga
aaaacaacgatttttgatgcgatttgttatgtgttatatggtgaggctagtggagaagaa
cgtagtgatacgagcatgcttcgaagtcaatttgctgatgatgatgtttatacaagtgta
gaactaacctttcaattaaaagggaaacgctatgaaataaaaagacaacttggacataaa
aaacaagggaataagaccattacaggacatgcagtagaattatatgaagttattgatgga
gaaaacgttccagccgtcgatcgttttcatgtaacagacgtaaacaaaaaagtggaagat
ttaattgggttaagtaaacatcaatttagtcaaattgttatgttaccacaaggtgaattc
cgaaaactattaacatctgagacggaaaacaaagaagagattttacgtcgtatttttaaa
acggatcgttataaattaatgcgtgagttacttgatcaaaagagaaaacaatggaaagat
gttttacaagaaaaacaaaaagagagagagctctatttccgtaatgtttttaaattacca
atccgtgatggagcattattagagacattagcggcacaagaacatgtaaatacgcatcaa
gtagtagaagcgttagaacaagaaacaacagtgtataaggcagaggttgagcaattacaa
gtagaacaagatgttcaaacgaagcaattaaaggatgcagaaacacgttttcatgcagca
aaatctgtaaatgagaaatttatagatttacaacaaaagaatgagaaatataacacttta
caagagaaccgtgcagcaattgaaaggaaagaaaaatcctttaaacgtgcggaacaagca
aagcgcttattaccatttgaacaatggtatgaagaagcgatgcaaaatgagcagaaagct
gaaagtttgttaaaacagataatcgtcaaacaagaacagataatgaacagctttgaactt
gctcaggagaagtatgaagtagtaaagaataaagaagctgaacgagaagaggctaaaaaa
cttgttcaaagattagaagagttacaagcaatcattgaatcattagctgagagaaagctg
aatttacaaaatgccgaaattcaaatagggaaattaaaagaaagtatgcaaaagttggat
caacaactagaagagcatacaagccaaaaacagagaatgtctgatgaattgcagcaatta
gaacaagcacttgagcaatatgtagctaaagtagaagaactaacgaatatgcgagaagat
gcaaaagttttaaagcaagcgtatgatgtttggcaagaaaaacaaaaattcgagcaagaa
aaagaagtggcaaataataaaatgcacgtggtagttcgtgcatatgaaaacatggagcgc
cgttggttaagtgaacaagctggtatattagctcttcatttacatgacggtgcatcttgt
ccggtatgtggtagtacgaatcatccgcaaaaagctacagagcaaagtaatgcgatcgat
gaaaaagagttaaacgatttaagagataagaagaacattgctgaaaaattacatgtgcaa
gtagaggagaaatggaatttttatcgactacaatatgaacaagtgatagaagaagttgtg
aagcgtggctataactccgaaaaattagttgaaacatatagtgtacttgttcaaaaagga
aaacaattagcagcagacgttaatacgttaaaagcaagtgaagaaacacgtaagcagatt
gctgcgaacatgaaaagcgtagaagaaagaatagaagaacttcagaaacaaaaacgggaa
gtagaaataatgcagcaccgtacagaaatggagtgcatgcaacttcgtacgtcatatgaa
catgataaacgaaatattccagaaaacttgcaaacagtacaagcttggaaagcacagttt
gaccaagctatgcacgaacttaggttaatggaggacgaatggaagaaagtgcaggaagcg
tatcaacattggcaaaatgaaaatatacgtattcaagcagaacagaaaggtgcttctaat
caatttgaaagtgcaaaattgaagaaagaagagactttcgcacgctttatgaaagagcta
gaacaaagcggatttacagatcaattcacgtataaagaagccaaattaagcgatgccgag
atggagatgttacagaaagaaattcaaggttattattcatctcttgaagtgcttgcaaaa
caaattgaagagctaaactcagaattaaaagataaagagtatatggatattacatcttta
ggtgaacacataaaagaactagaaattaatctcgatataattaaagaaaaacgtcaacgt
gcgcaaaatgcagtaacatatatttctgatttacatgaaaacattagaagtattgacgaa
caaattcacgaggaagaaaaagccttccaagaacttgttgacttatatgaagtaatgaaa
ggtgataacgagagccgtatatcatttgaacgttacattttaattgagtatttagaacaa
atcgttcaaatcgcaaacgaacgactacgtaaattatcaaatggacaattttatttaaaa
cgaagtgaacgagttgaaaaaagaaaccgtcaaagtggattaggcttagatgtatacgat
gcatacactggccaaacacgcgatgtaaaaacactttccggcggagagaaatttaacgca
tcactttgcctagcgctagggatggcagatgtcattcaagcatatgaaggtggtatttcc
atcgaaacgatgttcatcgatgaagggttcggttcattagatgaagaatcattaacgaaa
gcagtagatgctttaattgacttacaaaaatcaggccgatttatcggtgtcatttcacac
gtacaagaattgaaaaacgcaatgccagctgtattagaagtaacgaagcagaaggatggg
tgtagtcagacgcggtttgtggtgaagtaa
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