Bacillus thuringiensis serovar thuringiensis IS5056: H175_ch2420
Help
Entry
H175_ch2420 CDS
T02474
Name
(GenBank) ATP-dependent RNA helicase BA2475
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
btht
Bacillus thuringiensis serovar thuringiensis IS5056
Pathway
btht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H175_ch2420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btht03019
]
H175_ch2420
03009 Ribosome biogenesis [BR:
btht03009
]
H175_ch2420
Enzymes [BR:
btht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H175_ch2420
Messenger RNA biogenesis [BR:
btht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H175_ch2420
Ribosome biogenesis [BR:
btht03009
]
Prokaryotic type
rRNA helicases
H175_ch2420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
RRM_ESF1
Motif
Other DBs
NCBI-ProteinID:
AGG01133
LinkDB
All DBs
Position
2401560..2402936
Genome browser
AA seq
458 aa
AA seq
DB search
MVYLKNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFV
LPILEKIDPECSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRK
LKGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSK
QTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAKPDALRFVMD
RDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIA
TDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIE
KTLGAPIQREIIEQPKIKRVDENGKPVPKPAPKKSGQNRQRDSREGSRSESRRDSRNSSR
SDSRNSSRNSSRNENNRSFNKPSNKKGSTKQGQQRRGR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtggtctatttgaaaaactttttagaattaggaattagtgaaacttttaatcatacatta
cgtgaaaatggaattacagaagcaacaccaattcaagagaaggcaattccagttattatg
tcaggtaaagatattattgggcaggcgaaaacaggaacgggtaaaacgttagcattcgtg
ttaccgattttagaaaaaatcgatccagagtgtagtgatgttcaggctttaatcgttgcg
ccaacaagggaactagccctgcaaattacaactgaaattaaaaaaatgcttgttcaaaga
gaagatattaatgtactagcgatatatggcgggcaagatgtcgcacaacagttgagaaaa
ttaaaaggtaatacacatattgttgtagcgacaccgggacgattattagatcatatacgc
cgtgaaacaattgatttaagtaatctttcaacgattgtattagatgaagcggatcaaatg
ctttattttggtttcttatatgatattgaagatattttagatgagacacctggtagtaaa
caaacgatgttattctcagcaacgatgccaaaagatattaaaaaattagcgaagcgttat
atggatgagccgcaaatgattcaagtacaaagtgaagaagtaacggtagatacaattgaa
cagcgtgtcattgagacgacagatcgtgcaaagccagatgcacttcgttttgttatggat
cgtgatcagccgtttttagcagttattttctgtcgtacaaaggttagagcaagtaagctt
tatgataatttaaaaggactaggttataattgtgctgaacttcatggtgatatacctcaa
gcgaaacgtgaaagagttatgaagagtttccgcgaagctaaaattcagtacttaattgca
acggatgtagcagctcgtggacttgatgtagatggtgtaacgcacgtatttaattttgat
atccctgaagatgtagaaagttacattcaccgcattggccgaacaggacgtgcaggtgga
tcaggtcttgcaattacgttcgttgcagcgaaagatgaaaaacatttagaagaaattgaa
aaaacgcttggtgcaccaatacaaagagaaataatcgaacaaccgaagataaaacgtgta
gatgaaaatggaaaaccggtaccaaagccggctccaaagaaatcaggtcaaaatcgtcaa
agagatagccgcgaaggttcaagaagtgaatcaagacgtgattcgagaaatagctcgaga
agtgattcaagaaatagttcgagaaatagttctagaaatgaaaataaccgatcatttaat
aagccaagtaataaaaaaggtagtacaaagcaaggtcagcaaagacgtggccgttaa
DBGET
integrated database retrieval system
