Bacillus thuringiensis serovar thuringiensis IS5056: H175_ch3799
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Entry
H175_ch3799 CDS
T02474
Name
(GenBank) Ribonuclease J2
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
btht
Bacillus thuringiensis serovar thuringiensis IS5056
Pathway
btht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H175_ch3799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btht03019
]
H175_ch3799
Messenger RNA biogenesis [BR:
btht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H175_ch3799
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
AGG02511
LinkDB
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Position
complement(3770817..3772487)
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AA seq
556 aa
AA seq
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MKRKENESVKVFALGGVGEIGKNMYCVEIDSEIFIVDAGLMFPGDEMFGIDIVIPDITYL
VENEERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGRVDLK
TIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSGADLG
KMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNVHRIQ
QVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAILTTG
SQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEVVYYG
ERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIFIVEKG
DVIAFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLGKDEKK
IISGPEIISRGFVYVRESEALIERSTEIVRMIVEQSIKEYSIEWSMLKQNIRELLGQFLY
EETKRKPMILPIIMEV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaaagagaatgagtctgttaaagtatttgctcttggtggagtaggtgaaatc
gggaaaaacatgtactgtgttgaaattgattctgaaatctttatcgtagatgcggggtta
atgttcccgggagatgaaatgtttggaattgatatcgttattcctgatattacatattta
gtggaaaatgaagagcgagtaaaaggtttatttattactcacggtcatgaagatcatatt
ggtggaattgtgtatgtgcttcgtaaattatctattccagtctatgcaacgaaattaaca
gtaggacttatacaagaaaaacttggtgaagcgggcatgttaggccgtgtagacctaaaa
acaatcgattcaaattcaacagtagagtttaacactacaacagtgtcattcttcggaacg
acacatagtattccggattctgttggcgtttgtttccatacatcaaaaggtgcaatcgta
tatacgggagactttaaattcgatcaaactccaattggaaatagtggagcagatcttggg
aaaatggcgcaaatcggaaatgaaggtgtactttgcctattatctgatagtacaaatgca
gagcgtccagggtatacaggttcagaaaaagaagttggtgtagaaatttctaaagtgttc
tacggtgcagaaggtcgtattatcgttgcttcatttgcatcgaatgtacatcgtattcaa
caagtatttgatgcagctgccgaaacagggcgaaaagtagccgtagtaggacgtagtatg
gtgaaagtagtagacattgcaagacgtcttggttatttagatgttccagaaggtatggtt
atttcattacaagaagtagacaacttcccagagaaaaaggtagctattttaacgacaggt
agtcaaggtgaaccgatggctgctctatctagaatggcaaaacaagcacataaacaaatt
tcaattcgtaaaggtgatactgttatcattgctgcttcgccaattccgggtaatgaaata
tctgtatcaaaaattattgatttgttatttagagctggagctgaagttgtttattacggc
gaaagaaaagttcacgtttcaggtcacggtagccaagaagaattaaaattaatgttaaat
ttaatgaaaccgaagtactttgtacccgtacatggcgagtttcgtatgcaaaaagcacat
gcgtatttagctgaagatgtaggtattacaagagaaaatatctttatcgtagaaaaaggc
gatgtaattgcttttggtgacgatgaagcgaacttagtcggtaaagtacaagctggtaat
gttttaattgatggattaggtgtaggtgacgttggtaatatcgttcttcgagatagaaag
atgttatctcaagatggaatattagtagttgttgtaacacttggtaaagatgaaaagaaa
attatctctggtccagaaatcatttcacgtggtttcgtatatgttcgtgaatcagaagcg
ttaattgaacgatctacagagattgtacgtatgattgttgagcagtcaattaaagaatat
tcgattgaatggtcaatgttaaaacaaaatattcgtgaattattaggacagttcttgtac
gaagagacaaagagaaaacctatgattttaccgattattatggaagtataa
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