Bacillus thuringiensis serovar thuringiensis IS5056: H175_ch4372
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Entry
H175_ch4372 CDS
T02474
Name
(GenBank) ATP-dependent RNA helicase YqfR
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
btht
Bacillus thuringiensis serovar thuringiensis IS5056
Brite
KEGG Orthology (KO) [BR:
btht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btht03019
]
H175_ch4372
03009 Ribosome biogenesis [BR:
btht03009
]
H175_ch4372
Enzymes [BR:
btht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H175_ch4372
Messenger RNA biogenesis [BR:
btht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H175_ch4372
Ribosome biogenesis [BR:
btht03009
]
Prokaryotic type
rRNA helicases
H175_ch4372
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AGG03084
LinkDB
All DBs
Position
complement(4281020..4282330)
Genome browser
AA seq
436 aa
AA seq
DB search
MTQQTFTQYDFKPFLIDAVRELRFTEPTGIQQKIFPVVKKGVSVIGQSQTGSGKTHAYLL
PTLNRINASREEVQLVITAPTRELAQQIYEEIVKLTKFCAEDQMITARCLIGGTDKQRSI
EKLKKQPHIVVGTPGRIKDLVEEQALFVHKANTIIVDEADLMLDMGFIHDVDKIAARMPK
NLQMLVFSATIPQKLKPFLKKYMENPEHIHINPKQVAAGNIEHYLVPSKHRNKIDLVNKM
LLQFKPYLAVVFTNTKKMADQVADGLMERGLKVGRIHGDLSPRDRKKMMKQIRDLEFQYI
VATDLAARGIDIEGISHVINYELPSDLDFFVHRVGRTARAGHSGIAVTIYDPANEEALDS
LEKQRHIEFKHVDLRGDEWADLGERRRRKSRKKPNDELDVMATKVIKKPKKVKPNYKRKL
ATERDKVKRKYSNKKR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacacaacaaacttttacacagtatgattttaaaccatttttaatagatgcagttcgt
gaactacgctttacagagccgacaggaattcagcagaaaattttcccggtcgtgaaaaaa
ggtgtaagtgtaattggacaatcccaaacaggttctgggaaaacacatgcatacttactt
cctacattgaacagaattaatgcaagccgtgaagaagtacaacttgttattacagcacct
actcgtgagttagcacaacaaatttacgaagagattgtgaaattaacaaaattctgtgcg
gaagatcaaatgattacagcgcgttgtttaattggtggaactgataaacaacgttcaatt
gaaaagttgaaaaaacaacctcatatcgtagtcgggacaccaggacgtattaaagactta
gtagaagaacaagcattatttgttcataaagcaaatacgattattgtcgatgaagctgac
ttaatgcttgatatgggattcattcacgatgtagataaaattgcagcacgcatgcctaaa
aacttgcaaatgctagttttctctgcaacaattcctcaaaaactaaaaccgtttctgaag
aaatatatggagaatccagagcatattcatatcaatccaaaacaagttgcagctggaaac
attgaacactatttagtgccttctaaacatcgtaataaaattgatttagtgaataaaatg
ctacttcaatttaaaccgtatttagcagttgttttcacgaatacgaaaaaaatggcagat
caagttgctgatggattaatggaacgcggcttaaaagttggacgaattcacggggattta
tcaccacgtgatcgtaaaaaaatgatgaaacaaattcgtgaccttgaattccaatatatt
gttgcgactgatttagcagcacgtggtattgatattgaaggaattagccatgttattaac
tatgaactaccatcagatttagatttcttcgttcaccgcgttggaagaacagcacgtgcg
gggcattctggtattgcagtgacgatttatgatccagcaaacgaagaagcattagatagc
ttagaaaaacaacgtcatatcgagtttaaacatgtagatttacgcggagatgagtgggcg
gatttaggtgagcgtcgtcgtcgtaagagccgtaaaaaaccaaatgacgaacttgatgtt
atggcaacgaaagttattaaaaaaccgaaaaaagtaaaaccaaactataaacgtaaactt
gcaacagaacgtgacaaagtgaagagaaaatatagcaataaaaaaagataa
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