Bacillus thuringiensis serovar thuringiensis IS5056: H175_ch5280
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Entry
H175_ch5280 CDS
T02474
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
btht
Bacillus thuringiensis serovar thuringiensis IS5056
Pathway
btht03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
btht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H175_ch5280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btht03400
]
H175_ch5280
DNA repair and recombination proteins [BR:
btht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H175_ch5280
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H175_ch5280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_7
AAA_19
AAA_30
AAA
AAA_22
UFL1
DUF1280
UvrD-helicase
AAA_16
HH_RND_rel
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AGG03989
LinkDB
All DBs
Position
complement(5138451..5140427)
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AA seq
658 aa
AA seq
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MEHQFEIISAYSPQGDQPVAIEKLVEGINSGKKKQVLLGATGTGKTFTISNVIKEVQKPT
LVMAHNKTLAGQLYSELKDFFPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDAQINDEID
KLRHSATSALFERDDVIIVASVSCIYGLGSPEEYRELVVSLRVGMEKDRNQLLRELVDVQ
YGRNDIDFKRGTFRVRGDVVEIFPASLDEHCIRIEFFGDEIDRIREVNALTGEVLAERDH
VAIFPASHFVTREEKMKVAIENIEKELEERLKELNDNGKLLEAQRIEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPAGATPYTLLDYFPEDFLIVMDESHVSVPQVRAMYNGDQARKQV
LVDHGFRLPSALDNRPLMFDEFEEKTNQVIYVSATPGPYELEQSPEVIEQIIRPTGLLDP
PIDIRPIEGQIDDLLGEIQDRIAKNERVLITTLTKKMSEDLTDYLKDVGIKVNYLHSEIK
TLERIEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNENGRVIMYADRITRSMGIAIEETQRRRTIQEAYNKEHGITPKTIQKGVRDVIRATT
TAEETETYEATPAKKMTKKEREKTIAKMEAEMKEAAKALDFERAAELRDLLLELKAEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ttggaacatcaatttgaaattatatcagcgtattccccgcaaggtgatcagccggtagct
atagagaagcttgtagagggaattaatagtggaaagaaaaagcaagtgttgcttggagcg
acaggaacgggtaagacatttacgatttcaaatgtcattaaagaagtgcaaaagccaaca
cttgtcatggctcacaataaaacattagcaggacagttatatagtgagctaaaagacttt
ttcccgaataatgcagttgaatattttgttagttactacgattattatcagccagaagcg
tatgtaccacaaacagatacgtttattgaaaaggacgcgcagattaatgatgaaattgat
aaattgcgtcactcggcaacgtctgcattatttgaacgggacgatgtaattatcgttgcg
agtgtatcgtgtatatatggtttaggttctcctgaagaataccgcgagttagttgtgtca
cttcgagttggtatggagaaggaccgcaatcaattgcttcgtgaacttgttgatgtacag
tatggacgtaatgatattgatttcaagcgtggtacattccgtgtgcgcggagatgtagtt
gaaatcttcccagcatcacttgatgagcattgtattcggattgaatttttcggcgatgaa
attgatcgtattcgtgaagtaaatgcgttaacaggtgaagtattggcagaacgtgatcat
gtagcaatcttcccagcatctcacttcgttacacgtgaagagaaaatgaaggtcgctatt
gaaaatatcgaaaaagaattagaagagcgtttaaaggaattaaatgataacggtaagttg
ctagaagcacagcgtatagagcaacgtacacgttatgatttagaaatgatgcgcgagatg
ggcttttgttcaggtattgaaaactattcccgtcatttaacacttcgtccagcgggtgca
acaccgtatacgttattggactatttcccggaagatttcttaattgttatggatgagtcg
cacgtatcagtgccacaagtaagagcgatgtataacggggaccaagcacgtaagcaagta
cttgtggatcatggattccgtctgccatcagctttagataatagaccgctcatgtttgat
gagtttgaggagaaaacaaatcaagttatttacgtttcggcgactccaggaccgtacgag
ttagagcagtcaccagaagtaatagaacaaattattcgtccaacagggcttttagatcca
ccaatcgatatacgacctattgaagggcaaattgacgatttattaggagagattcaagat
cgtattgcaaaaaatgaacgtgtattaattacgactttaacgaagaaaatgtcagaggat
ttaacggactacttaaaagatgtaggaattaaagtgaactatcttcactctgaaattaaa
acgttagaacgtattgaaattatccgcgatcttcgcctcggtaagtttgatgtactggtc
ggtattaacttattacgagaaggattagatattccagaagtatcacttgtagcgatttta
gatgctgataaggaagggttcttacgttcagagcgctcattaattcaaacaattggtcgt
gccgcgcgtaatgaaaacggccgcgttattatgtacgcagatcgtataacaagatccatg
ggaattgcaattgaagaaacgcagcgtcgtcgtactatacaagaagcctacaataaagag
catggtattacgccgaaaacgattcaaaaaggcgtacgtgatgtaatccgtgcaacgaca
actgctgaagagacagaaacatacgaagcaactcctgctaagaaaatgacgaaaaaagag
cgtgaaaagacaattgcgaagatggaagcagagatgaaagaagcagcaaaagcgttagac
ttcgagcgtgcagctgaactaagagatttactattagaattaaaagcggaagggtga
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