Bacillus thuringiensis serovar thuringiensis IS5056: H175_ch5529
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Entry
H175_ch5529 CDS
T02474
Name
(GenBank) Uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
btht
Bacillus thuringiensis serovar thuringiensis IS5056
Pathway
btht03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
btht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H175_ch5529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btht03400
]
H175_ch5529
Enzymes [BR:
btht01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
H175_ch5529
DNA repair and recombination proteins [BR:
btht03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H175_ch5529
Prokaryotic type
H175_ch5529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGG04238
LinkDB
All DBs
Position
complement(5392636..5393313)
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AA seq
225 aa
AA seq
DB search
MENVLKNDWGPLLAPEFEKEYYRTLSNFLTEEYSTHVVYPKVEDIFNALQYTSYENTKVV
ILGQDPYHGPNQAHGLSFSVQPDVKTPPSLLNMYKELRDEYGYEIPNNGYLVKWAEQGVL
LLNTVLTVRQGEANSHKGKGWEHFTDRVIELLNERAKPVVFILWGRHAQAKKKLITNPNH
HIIESVHPSPLSARRGFFGSKPYSKVNTILANMGEREIDWEIPNL
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgttttaaagaatgattggggaccattattggcaccagaatttgagaaagag
tattatcgtactctatccaattttttgacagaagagtacagcacgcatgttgtttatccg
aaagtagaagatatttttaacgctcttcagtatacaagttatgaaaatacaaaggttgtt
attttaggacaagatccatatcatggaccgaatcaagcgcatggtttaagtttttctgta
caacctgatgttaaaacaccaccatcattgttaaatatgtataaagaacttcgagatgaa
tatggttatgaaatcccgaataacggttatttagtaaaatgggcggaacaaggagtatta
ctactaaataccgtattaacagttcgtcaaggcgaagcaaattctcataagggaaaagga
tgggagcacttcacagatcgtgtgattgaactgttgaacgaacgtgcaaagccagttgtt
ttcatattgtgggggcgccatgcgcaggcgaagaagaagttaattacgaatccgaatcat
catattatcgaatctgtacatccaagcccattatcggcaagacgtggtttctttggtagt
aagccatactctaaagtaaatacgattttagctaatatgggagaaagagaaattgattgg
gaaattccaaatttataa
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