Bacillus thuringiensis YBT-1518: YBT1518_01165
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Entry
YBT1518_01165 CDS
T02930
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bthu
Bacillus thuringiensis YBT-1518
Pathway
bthu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bthu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YBT1518_01165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bthu03019
]
YBT1518_01165
03009 Ribosome biogenesis [BR:
bthu03009
]
YBT1518_01165
Enzymes [BR:
bthu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
YBT1518_01165
Messenger RNA biogenesis [BR:
bthu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
YBT1518_01165
Ribosome biogenesis [BR:
bthu03009
]
Prokaryotic type
rRNA helicases
YBT1518_01165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AHA69465
UniProt:
A0A9W3PDQ7
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All DBs
Position
238084..239649
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AA seq
521 aa
AA seq
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MTTFRELGLSESLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL
LDKVDTNKEAVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKH
PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL
FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSP
ELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGAIEVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTK
RKVDRMEAPTLDEALEGQQRLIAEKLQSTIQNENLSYYKRIAEEMLEENDSVTVVAAALK
MMTKEPDTTPIALTSEPPVVSRGGGSKKRGGNGGGYRDGNRNRSRDGRGGGDGRNRDGRN
RDGNRDRNRDGGSRGRRGEGQGRPGSSNGRGERKHHSRPQA
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcgagaattaggattaagtgagtctttactgcaatcggttgaaagtatg
ggctttgaagaggctacgccgattcaagctgaaacaattccacatgcattgcaaggtaag
gatattattgggcaagcgcaaacaggtacagggaaaacagcagcattcggattaccacta
ttagataaagtggatacaaataaagaagcagttcaaggtattgttatcgcgccaacgcgt
gaattagcaattcaagttggagaagagctatacaaaattggtaaacataaacgtgttcgt
attctaccaatttatggtggtcaagatattaaccgccaaattcgtgctctaaaaaaacac
ccacacattattgttggtacgccgggtcgtattttagatcatattaaccgtaaaacactt
cgcttacaaaacgtagagactgttgttcttgatgaagcggatgaaatgttaaacatgggc
ttcattgaagatattgaagcgattttaacagatgtgccagaaacacatcaaacattatta
ttctcagcgacaatgccagatccaatccgtcgtattgctgagcgtttcatgactgagcct
caacacattaaagtaaaagcaaaagaagtaacaatgccaaacattcagcagttctattta
gaagtgcaagaaaagaaaaagtttgacgtgttaacacgcttactagatattcaatctcca
gagcttgcgatcgtattcggtcgtacaaagcgtcgtgttgatgaattatcagaagcatta
aacttacgtggttatgcagcagaaggtattcatggtgacttaacacaggcgaaacgtatg
tctgtattacgtaaatttaaagaaggtgctattgaagttcttgttgcaacagacgttgct
gcacgtggtcttgatatttcaggcgtaacacacgtatacaacttcgatatcccacaagat
ccagaatcatacgttcaccgtatcggtcgtactggccgtgcaggtaaaaaaggtattgca
atgttatttgtaacaccacgtgaatcaggacaattaaaaaatatcgagcgtacaacaaag
cgtaaagttgatcgtatggaagcaccgacacttgatgaggcattagaaggtcaacaacgt
ttaatcgctgaaaaacttcaaagcacaatccaaaatgagaacttatcatactacaagcgt
attgcagaagaaatgttagaagagaatgactctgtaacagtagtagctgctgctttaaaa
atgatgactaaagagccggatacaactccgatcgctttaacatcagaaccaccagttgtt
tcaagaggtggcggttctaaaaaacgtggcggtaacggaggcggataccgtgatggtaac
cgtaatcgtagtcgtgacggacgtggcggtggcgatggtcgtaaccgtgatggacgtaat
cgtgacggaaaccgtgatcgcaatcgtgatggtggtagtcgtggtcgtagaggtgaaggt
caaggtcgcccaggatcttcaaatggacgcggcgaaagaaaacatcatagccgtccacaa
gcttaa
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