Bacillus thuringiensis YBT-1518: YBT1518_20745
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Entry
YBT1518_20745 CDS
T02930
Name
(GenBank) phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bthu
Bacillus thuringiensis YBT-1518
Pathway
bthu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bthu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YBT1518_20745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bthu03019
]
YBT1518_20745
Messenger RNA biogenesis [BR:
bthu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YBT1518_20745
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF4407
DUF2844
Golgin_A5
Motif
Other DBs
NCBI-ProteinID:
AHA73277
UniProt:
A0A9W3KG61
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Position
complement(4102719..4104284)
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AA seq
521 aa
AA seq
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MSSTVWILISILLATTVGAVVGFFVRKSIAEAKINGAANEAKRILDEANREAEALKKEAL
LEAKDEIHTLRTEAELEIRDRRSELQKQENRLMQKEENLDRKDETLDKREQQLEKKEDSL
VARQQQIEELESKVGELVQKQQTELERISNLTREQAKAIILGKVENEVSHEIAVMVKESE
VRAKEEADKKAKEILSLAMQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETL
TGIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYI
REVGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSMEVAYLTGLMAAELGEDEK
LARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVL
VAAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRILVKPDTI
DDLEAHRLARDIRKRIENELDYPGHIKITVIRETRAVEYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtacagtttggatactcatctccattttgcttgcaacaacagtcggtgcagtt
gttggcttttttgttcgaaagtctattgctgaagcgaagattaatggtgcggctaatgaa
gcgaaacgtattctagacgaagcgaatcgtgaggctgaagcacttaagaaagaagcgctt
ttagaagcaaaggatgaaattcatacacttcgtacagaagctgaattagaaattcgtgac
cgtagaagcgaattacaaaaacaagaaaatcgtttaatgcaaaaagaagagaaccttgat
cgtaaagacgaaacgctcgataaacgcgagcagcagttagagaagaaagaggattctctt
gtagcgagacaacaacagattgaagagttggaaagcaaagtgggagagttagttcaaaag
caacaaacagaattagagcgcatttccaatctgacacgcgaacaagcgaaagcaattatt
cttggtaaagtagaaaatgaagtttctcatgaaatcgctgttatggtaaaagaaagtgaa
gttcgcgcgaaagaagaagcggataagaaagcaaaagagattttatctcttgcaatgcaa
agatgtgcagctgatcatgttgctgaaacaaccgtttcggttgtaaatcttccaaatgac
gaaatgaagggacgtattatcgggcgtgaaggtcgtaatattcgtacgttagaaacgtta
acgggtattgacttaattatcgatgatacaccagaggcggtaatcctttctggattcgat
ccaattcgtcgtgaaacagctcgtatcgctcttgataaactagtacaggacggacgtatt
cacccagcgcgtattgaagagatggtcgaaaaatcaagacgtgaagtggacgagtatatt
cgtgaagtcggagagcaaacaacgtttgaagtgggtgttcatggattacacccagattta
attaaaattttaggtcgtttaaaataccgtacaagttatggacaaaacgtcttaaaacac
tctatggaagttgcatatttaactggacttatggcagcagagcttggcgaggatgaaaaa
ctagcaagacgtgctggtctattacatgatatcggaaaagcgattgaccatgaagtagaa
ggtagccacgttgaaattggtgttgaactcgcaacgaaatataaagagcatcctgtagtt
ataaacagtatcgcatctcaccatggtgacacagaaccaacttctatcattgcagtttta
gttgcagcagcagatgctttatcagctgcaagaccgggagctcgtagtgaaacgcttgaa
aactacattcgtcgtcttgaaaagttagaagagatttcagagtcttatgaaggcgttgaa
aaatcatttgcaattcaagcaggacgtgaagttcgtattttggtaaaaccagatacaatc
gatgatttagaagctcatcgtttagctcgtgatatccgaaaacgtattgaaaatgaactg
gattacccaggacatattaaaataactgttattcgtgaaacacgtgcagtggaatacgca
aaataa
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