Bacillus thuringiensis YBT-1518: YBT1518_20840
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Entry
YBT1518_20840 CDS
T02930
Name
(GenBank) metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bthu
Bacillus thuringiensis YBT-1518
Pathway
bthu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bthu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YBT1518_20840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bthu03019
]
YBT1518_20840
Messenger RNA biogenesis [BR:
bthu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YBT1518_20840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
AHA73296
UniProt:
A0A9W3KFJ3
LinkDB
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Position
complement(4123360..4125030)
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AA seq
556 aa
AA seq
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MKRKENESVKVFALGGVGEIGKNMYCVEIDSEIFIVDAGLMFPGDEMFGIDIVIPDITYL
VENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGRVDLK
TIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSGADLG
KMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNVHRIQ
QVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAILTTG
SQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEVVYYG
ERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIFIVEKG
DVIAFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLGKDEKK
IISGPEIISRGFVYVRESEALIERSTEIVRMIVEQSIKEYSIEWSMLKQNIRELLGQFLY
EETKRKPMILPIIMEV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaaagagaatgagtctgttaaagtatttgctcttggtggagtaggtgaaatc
gggaaaaacatgtactgtgttgaaattgattctgaaatctttatcgtagatgcggggtta
atgttcccgggagatgaaatgtttggaattgatatcgttattcctgatattacatattta
gtggaaaatcaagagcgagtaaaaggtttatttattactcacggtcatgaagatcatatt
ggtggaattgtgtatgtgcttcgtaaattatctattccagtctatgcaacgaaattaaca
gtaggacttatacaagaaaaacttggtgaagcgggcatgttaggccgtgtagacctaaaa
acaatcgattcaaattcaacagtagagtttaacactacaacagtgtcattcttcggaacg
acacatagtattccggattctgttggcgtttgtttccatacatcaaaaggtgcaatcgta
tatacgggagactttaaattcgatcaaactccaattggaaatagtggagcagatcttggg
aaaatggcgcaaatcggaaatgaaggtgtactttgcctattatctgatagtacaaatgca
gagcgtccagggtatacaggttcagaaaaagaagttggtgtagaaatttctaaagtgttc
tacggtgcagaaggtcgtattatcgttgcttcatttgcatcgaatgtacatcgtattcaa
caagtatttgatgcagctgccgaaacagggcgaaaagtagccgtagtaggacgtagtatg
gtgaaagtagtagacattgcaagacgtcttggttatttagatgttccagaaggtatggtt
atttcattacaagaagtagacaacttcccagagaaaaaggtagctattttaacgacaggt
agtcaaggtgaaccgatggctgctctatctagaatggcaaaacaagcacataaacaaatt
tcaattcgtaaaggtgatactgttatcattgctgcttcgccaattccgggtaatgaaata
tctgtatcaaaaattattgatttgttatttagagctggagctgaagttgtttattacggc
gaaagaaaagttcacgtttcaggtcacggtagccaagaagaattaaaattaatgttaaat
ttaatgaaaccgaagtactttgtacccgtacatggtgagtttcgtatgcaaaaagcacat
gcgtatttagctgaagatgtaggtattacaagagaaaatatctttatcgtagaaaaaggc
gatgtaattgcttttggtgacgatgaagcgaacttagtcggtaaagtacaagctggtaat
gttttaattgatggattaggtgtaggtgacgttggtaatatcgttcttcgagatagaaag
atgttatctcaagatggaatattagtagttgttgtaacacttggtaaagatgaaaagaaa
attatctctggtccagaaatcatttcacgtggtttcgtatatgttcgtgaatcagaagcg
ttaattgaacgatctacagagattgtacgtatgattgttgagcagtcaattaaagaatat
tcgattgaatggtcaatgttaaaacaaaatattcgtgaattattaggacagttcttgtac
gaagagacaaagagaaaacctatgattttaccgattattatggaagtataa
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