Bacillus thuringiensis YBT-1518: YBT1518_25355
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Entry
YBT1518_25355 CDS
T02930
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bthu
Bacillus thuringiensis YBT-1518
Pathway
bthu03030
DNA replication
bthu03410
Base excision repair
bthu03420
Nucleotide excision repair
bthu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bthu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YBT1518_25355
03410 Base excision repair
YBT1518_25355
03420 Nucleotide excision repair
YBT1518_25355
03440 Homologous recombination
YBT1518_25355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bthu03032
]
YBT1518_25355
03400 DNA repair and recombination proteins [BR:
bthu03400
]
YBT1518_25355
Enzymes [BR:
bthu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YBT1518_25355
DNA replication proteins [BR:
bthu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
YBT1518_25355
DNA repair and recombination proteins [BR:
bthu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
YBT1518_25355
NER (nucleotide excision repair)
GGR (global genome repair) factors
YBT1518_25355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
WHD_BrxR
DNA_pol_P_Exo
HHH
Motif
Other DBs
NCBI-ProteinID:
AHA74189
UniProt:
A0A9W3KLB6
LinkDB
All DBs
Position
complement(4958622..4961255)
Genome browser
AA seq
877 aa
AA seq
DB search
MEKKVVLVDGNNIAYRAFFALPLLNNDKGIHTNAIYGFTMMLMRILEEEKPTHMLVAFDA
GKTTFRHKTYSEYKGGRQKTPPELSEQFSFIREMLDAFNVPRYELENYEADDIMGTLAKE
ASEQGASVKVISGDKDLLQLVSDNTLVCIPRKGITEVDEYTKEALFEKYSLSPKQIIDMK
GLMGDQSDNIPGVPGVGEKTAIKLLTQFGTVEEVYENLDQVSGKKLKEKLEENKEQALMS
KDLATIITDAPITVHVDDMAYKGYEASDVIPMFESLGFTSLLNKLGVTPEETAPAELDDI
TFDIVEEVTEEMLQQNSALIVEVQEDNYHKADIQGFGIQNENGCYFIQKDIALASDAFKA
WLANGEMRKHTFDAKRAIVALKWNGIDMQGIDFDLLIAAYLLDPADTDKDFRTVAKMKET
HAVKSDEEVYGKGAKRAVPELEVVAEHVARKVHVLYDVKQTFVEELKKNEQYELFTELEL
PLARVLADMEVKGVKVDTERLRNMGEELAGRLKEMEQEIYKLAETEFNINSPKQLGVILF
ENLNLPVIKKTKTGYSTSADVLDKLMDRHEIIPNILHYRQLGKLNSTYIEGLLKVVHEDS
SKIHTRFNQVLTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEEGWIMYAADYSQIEL
RVLAHIANDKGLVEAFQHDMDIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDY
GLSQNLGITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSR
NFNLRSFAERTAMNTPIQGTAADIIKKAMIIMADRLEEEGLQARLLLQVHDELIFEAPKD
EIEKLEQLVPEVMEHAIELAVPLKVDYSYGPTWYDAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaaaggtcgtattagtagatggtaataatatcgcgtatcgtgctttctttgca
ctaccgcttttaaataacgacaaaggtatacatacgaacgcaatttacggttttacaatg
atgttaatgagaatattagaggaagaaaagccaactcatatgttagtggcgtttgatgca
ggcaaaacaaccttccgtcataaaacgtatagtgagtataaaggaggacgtcaaaagact
ccacctgaattatcagagcagttctcgtttattcgtgagatgctggatgcattcaacgta
ccgcgttatgaattagaaaattatgaagcggatgatattatgggaacgctagcaaaagaa
gcgagtgaacaaggagcaagtgtaaaagttatttcaggagataaagatttacttcaactt
gtttctgataacacgcttgtatgtattccgcgaaaagggattacggaagtagatgaatat
acgaaagaagctttatttgaaaaatatagcttatcaccaaagcaaattatcgatatgaaa
ggtttaatgggagaccaatcagataatattccgggtgtaccaggagttggtgaaaaaacg
gcgattaaattgttaacacagtttggaacggttgaagaagtgtatgaaaatctagatcaa
gtaagcgggaagaaattaaaagaaaaactagaagaaaataaagaacaagctcttatgagt
aaagatcttgcgactattattacagatgcaccgattacagttcatgtggatgatatggcg
tataaaggatatgaagcaagtgatgtgattccaatgtttgagagtttaggatttacatct
cttttaaataaattaggcgttacgccagaagaaacagctccagctgaattagatgatatt
acatttgatattgtggaagaagttacagaagaaatgcttcagcaaaatagtgcacttatt
gttgaagtgcaagaagataattatcataaggcggacattcaaggctttggtattcaaaat
gaaaatggttgctactttattcagaaggatattgctcttgcatcggatgcatttaaagca
tggcttgcaaatggagaaatgagaaagcatacatttgatgcgaagcgagcaatcgttgca
ctgaaatggaatgggatagatatgcaagggattgactttgatctattaatcgctgcttat
ttacttgacccggctgatacagataaagatttccgtactgtagcgaaaatgaaagaaacg
catgctgtgaaatcagatgaagaagtttacggaaaaggtgcgaagcgtgctgttccagag
ttagaagtagtagcggagcatgtggctcgtaaagtgcatgtattatatgatgtaaagcaa
acattcgttgaagagttaaagaagaatgagcaatatgaactgtttacagagttagaattg
ccacttgcgcgtgtattagctgatatggaagtaaaaggtgtaaaagttgatacggagcgt
cttcgtaatatgggagaagaactcgcaggtagattaaaggaaatggaacaggaaatttat
aagcttgcggaaacagaatttaatattaattcaccgaagcagcttggtgtaattctgttt
gagaacttaaacttaccggttattaaaaagacgaaaacaggttattctacgtcagctgat
gtattagacaagcttatggatcgccatgaaattattccaaacattttacattatcgtcaa
ttagggaagctaaattcaacttatattgaaggtttactgaaagttgtacatgaagattca
tctaaaattcatactcgctttaatcaagtgttaacgcaaacaggtcgattaagttcaacg
gatccgaacttgcaaaatatcccgattcgattagaagaaggaagaaagattcgtcaggca
tttgttccatcagaagaaggttggattatgtatgcggctgattattcacaaatcgaactt
cgtgtattagctcatattgcaaatgataaagggctagttgaagcattccagcatgacatg
gatattcatacgaaaacagctatggatgtatttggcgttgaaaaagatgaagtaacttca
aatatgagacggcaagcgaaagctgttaacttcggaattgtgtatggtattagtgattat
ggtctttcacaaaacttaggaattacaagaaaagcagcagcggaatttattgaaaagtat
ttagaaagtttccctggtgtacaagaatacatggaggacatcgtaaaagatgcgaaacaa
aaaggatatgtggctacattattaaatcgtcgtcgttatattccagaaattacgagtcgt
aatttcaatttacgtagctttgctgagcgtacagcgatgaatacaccaattcaaggtact
gcagcagatattattaaaaaagcgatgattattatggcagatcgtttagaagaagaagga
ttacaagcgcgtcttcttctgcaagtacacgatgaattaatatttgaagcaccaaaagac
gaaattgaaaaattagagcagcttgtacctgaagtaatggagcatgcgattgaactcgca
gttccgctgaaagttgattattcttacggtccaacttggtacgacgcaaaataa
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