Caldibacillus thermoamylovorans: CQJ30_00125
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Entry
CQJ30_00125 CDS
T06263
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bthv
Caldibacillus thermoamylovorans
Pathway
bthv03030
DNA replication
bthv03430
Mismatch repair
bthv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bthv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CQJ30_00125
03430 Mismatch repair
CQJ30_00125
03440 Homologous recombination
CQJ30_00125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bthv03032
]
CQJ30_00125
03400 DNA repair and recombination proteins [BR:
bthv03400
]
CQJ30_00125
Enzymes [BR:
bthv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CQJ30_00125
DNA replication proteins [BR:
bthv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CQJ30_00125
DNA repair and recombination proteins [BR:
bthv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CQJ30_00125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_30
TIP49
AAA_5
AAA_assoc_2
AAA_16
AAA_19
Rad17
DNA_pol3_delta_C
AAA_14
Mg_chelatase
AAA_7
CIS_TMP
AAA_18
AAA_24
RNA_helicase
DnaX_C
PIF1
DUF3573
Not3
nSTAND3
AAA_28
DUF815
SlyX
TsaE
AAA_2
Cytochrom_B562
DYH2-5-8_CC
Motif
Other DBs
NCBI-ProteinID:
AWI10749
LinkDB
All DBs
Position
27984..29675
Genome browser
AA seq
563 aa
AA seq
DB search
MPYQALYRVWRPQIFEDVVGQQHVTKTLQNALLQQKISHAYLFTGPRGTGKTSAAKILAK
AVNCPNRKAAEPCNECSICKSITDGSNPDVIEIDAASNNGVEEIRDIRDKVKYTPNMSTF
KVYIIDEVHMLSIGAFNALLKTLEEPPKHVIFILATTEPHKIPLTIISRCQRFDFKRISP
QKIAEHMGSIINDYGYEYDQQALELIARASDGGMRDALSLLDQTISFSQGRISIEDALVI
TGSVSQQILHQIAGSILEKNPQAALTFLHTLLGEGKDPVRIIEDMIQYFRDILVYKNSPG
TQDFLERVIVDEDFQRLAEQFDSDEIYEIINRFNQVQQEMKWTNHPKIILEVCFVQLCQA
NFRNQQGAVSSDLITQLQEKIAYLEDQIQQLQVQGISEGQTPEESNNKQKQTKTVKHTFK
APVGKIENVLANATKQNLHQIKNNWGSILENLKKSHAALLNDAEPVASSSQGCVIKFKYE
IHCQMAINNGEFISTLTSLLQKVTGDPIEVIGVPENQWLEIRQSFLNEHRDLVKDQKKSD
NSGDPLIDEAIKLFGEDLLEIRD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgccttatcaagcattgtatcgtgtatggcggccacaaatttttgaagatgtagttgga
caacagcatgtaacaaaaacattacaaaatgccctcttacaacaaaaaatttctcatgcc
tatttatttaccggacctaggggaacaggaaaaacaagtgccgcaaaaattttagcaaag
gcagtgaattgtccgaataggaaagcggcagagccttgtaatgaatgttctatttgtaag
agtatcacggatggatcaaatccggatgtaatcgaaatcgatgctgcatccaataacggt
gttgaagaaattcgtgatattcgcgataaagtcaaatatacaccaaacatgtctacattc
aaggtatatattatagatgaagttcatatgttatccattggtgcgtttaatgcattgcta
aaaactttagaggaaccgccaaagcatgtaattttcatattagcaactacggaaccccat
aaaataccgttaacgattatttcccggtgtcaacgttttgattttaagcggatttctccc
caaaaaattgctgagcatatgggttctattattaacgactatgggtatgaatatgatcaa
caagcattggaactgatagcaagagcttctgatggcgggatgcgggatgcgttaagttta
ctggaccaaaccatttccttcagtcaaggaagaataagtattgaagatgcactcgtcata
acgggttctgtatcacaacaaatattacatcaaattgccggttcgattcttgaaaaaaat
ccgcaagcagcattaacttttttacatacactattaggagagggaaaagatccggtccgc
attattgaagatatgattcaatatttccgggatatacttgtatacaaaaattccccgggc
acgcaagattttttggaacgtgtaattgtcgatgaagattttcaaagattggcggaacaa
tttgattctgatgaaatttatgaaatcattaataggtttaatcaagttcaacaagaaatg
aaatggacaaatcatcctaaaattattctggaagtttgttttgtccaattatgccaagca
aactttcggaatcaacaaggagctgtttcctctgatttgattacacaactacaagagaaa
attgcttacctggaagatcaaattcaacaattgcaagtacaaggcattagtgaaggacaa
acaccagaggaaagtaataacaaacaaaaacaaacaaagacagttaagcatacatttaaa
gctccggttggtaaaatagaaaatgtattagcaaatgcgacaaagcaaaatttgcatcaa
attaaaaacaactgggggtcgattttggaaaacttgaagaagtcacatgctgcattgtta
aatgatgctgaaccggttgcgtcgtcatcccagggctgtgttatcaagtttaaatatgaa
attcattgtcaaatggcaataaataatggagaatttattagtacattaactagtttgctt
caaaaagttactggagatccaatagaagtaattggtgttcccgaaaatcagtggctggaa
atccgtcagtcttttttaaatgaacatcgagaccttgttaaagatcaaaagaaatcagac
aatagcggtgaccccctgatagatgaagcaattaaattatttggtgaagatttactggaa
ataagagattaa
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